Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 Gm14042-201ENSMUST00000120139 833 ntBASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 Mir6990-201ENSMUST00000183724 91 ntBASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ClcnkaQ9WUB7 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Gm44335-201ENSMUST00000196879 141 ntBASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Gm44297-201ENSMUST00000198304 141 ntBASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Gm44346-201ENSMUST00000198851 141 ntBASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Chchd1-203ENSMUST00000224633 557 ntBASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.11□□□□□ -0.31
ClcnkaQ9WUB7 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Gm43125-201ENSMUST00000201724 730 ntBASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
ClcnkaQ9WUB7 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClcnkaQ9WUB7 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms