Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scn11aQ9R053 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Scn11aQ9R053 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC16.59■□□□□ 0.25
Scn11aQ9R053 AC131997.1-201ENSMUST00000228611 1229 ntBASIC16.59■□□□□ 0.25
Scn11aQ9R053 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn11aQ9R053 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn11aQ9R053 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scn11aQ9R053 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scn11aQ9R053 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scn11aQ9R053 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Scn11aQ9R053 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scn11aQ9R053 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scn11aQ9R053 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn11aQ9R053 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn11aQ9R053 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Scn11aQ9R053 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Scn11aQ9R053 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC16.58■□□□□ 0.24
Scn11aQ9R053 Gm5940-201ENSMUST00000117582 1068 ntBASIC16.58■□□□□ 0.24
Scn11aQ9R053 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Scn11aQ9R053 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC16.58■□□□□ 0.24
Scn11aQ9R053 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Scn11aQ9R053 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC16.58■□□□□ 0.24
Scn11aQ9R053 Gm8652-201ENSMUST00000181363 964 ntBASIC16.58■□□□□ 0.24
Scn11aQ9R053 Gm37466-201ENSMUST00000195692 652 ntBASIC16.58■□□□□ 0.24
Scn11aQ9R053 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC16.58■□□□□ 0.24
Scn11aQ9R053 Gm18056-201ENSMUST00000207670 568 ntBASIC16.58■□□□□ 0.24
Scn11aQ9R053 Gm18061-201ENSMUST00000208350 562 ntBASIC16.58■□□□□ 0.24
Scn11aQ9R053 Gm18063-201ENSMUST00000208529 568 ntBASIC16.58■□□□□ 0.24
Scn11aQ9R053 Gm18052-201ENSMUST00000208750 559 ntBASIC16.58■□□□□ 0.24
Scn11aQ9R053 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn11aQ9R053 Gm7399-201ENSMUST00000032395 858 ntBASIC16.58■□□□□ 0.24
Scn11aQ9R053 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Scn11aQ9R053 Gm10040-201ENSMUST00000080726 1662 ntBASIC16.58■□□□□ 0.24
Scn11aQ9R053 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Scn11aQ9R053 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Scn11aQ9R053 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.58■□□□□ 0.24
Scn11aQ9R053 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Scn11aQ9R053 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn11aQ9R053 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn11aQ9R053 Gm13050-201ENSMUST00000122149 1345 ntBASIC16.58■□□□□ 0.24
Scn11aQ9R053 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn11aQ9R053 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn11aQ9R053 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Scn11aQ9R053 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scn11aQ9R053 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC16.57■□□□□ 0.24
Scn11aQ9R053 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.57■□□□□ 0.24
Scn11aQ9R053 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scn11aQ9R053 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn11aQ9R053 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn11aQ9R053 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Scn11aQ9R053 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.57■□□□□ 0.24
Scn11aQ9R053 Gm13886-201ENSMUST00000117876 1183 ntBASIC16.57■□□□□ 0.24
Scn11aQ9R053 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scn11aQ9R053 Proscos-202ENSMUST00000178990 666 ntBASIC16.57■□□□□ 0.24
Scn11aQ9R053 Gm38223-201ENSMUST00000194484 695 ntBASIC16.57■□□□□ 0.24
Scn11aQ9R053 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scn11aQ9R053 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Scn11aQ9R053 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Scn11aQ9R053 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Scn11aQ9R053 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Scn11aQ9R053 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn11aQ9R053 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC16.57■□□□□ 0.24
Scn11aQ9R053 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Scn11aQ9R053 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Scn11aQ9R053 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Scn11aQ9R053 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn11aQ9R053 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn11aQ9R053 Mir698-201ENSMUST00000102164 109 ntBASIC16.56■□□□□ 0.24
Scn11aQ9R053 Mir7070-201ENSMUST00000183657 86 ntBASIC16.56■□□□□ 0.24
Scn11aQ9R053 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn11aQ9R053 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn11aQ9R053 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Scn11aQ9R053 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn11aQ9R053 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn11aQ9R053 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn11aQ9R053 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.56■□□□□ 0.24
Scn11aQ9R053 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn11aQ9R053 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn11aQ9R053 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scn11aQ9R053 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn11aQ9R053 Gm42442-201ENSMUST00000197951 1133 ntBASIC16.56■□□□□ 0.24
Scn11aQ9R053 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scn11aQ9R053 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC16.56■□□□□ 0.24
Scn11aQ9R053 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC16.56■□□□□ 0.24
Scn11aQ9R053 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC16.56■□□□□ 0.24
Scn11aQ9R053 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn11aQ9R053 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn11aQ9R053 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn11aQ9R053 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn11aQ9R053 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.56■□□□□ 0.24
Scn11aQ9R053 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn11aQ9R053 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn11aQ9R053 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.55■□□□□ 0.24
Scn11aQ9R053 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn11aQ9R053 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Scn11aQ9R053 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn11aQ9R053 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Scn11aQ9R053 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Scn11aQ9R053 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
Scn11aQ9R053 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms