Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Gm15460-201ENSMUST00000118147 391 ntBASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk3aQ9JKX8 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Gm37714-201ENSMUST00000194742 342 ntBASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Gm18027-201ENSMUST00000218947 619 ntBASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Upk3aQ9JKX8 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Upk3aQ9JKX8 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3aQ9JKX8 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3aQ9JKX8 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3aQ9JKX8 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3aQ9JKX8 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3aQ9JKX8 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3aQ9JKX8 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3aQ9JKX8 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Upk3aQ9JKX8 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3aQ9JKX8 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3aQ9JKX8 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.65□□□□□ -0.22
Upk3aQ9JKX8 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3aQ9JKX8 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3aQ9JKX8 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3aQ9JKX8 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Upk3aQ9JKX8 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Upk3aQ9JKX8 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3aQ9JKX8 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3aQ9JKX8 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3aQ9JKX8 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3aQ9JKX8 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.65□□□□□ -0.22
Upk3aQ9JKX8 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3aQ9JKX8 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3aQ9JKX8 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3aQ9JKX8 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3aQ9JKX8 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk3aQ9JKX8 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms