Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Gm44430-201ENSMUST00000203376 995 ntBASIC11.38□□□□□ -0.59
Smco4Q9JIS3 AC122351.1-201ENSMUST00000220467 126 ntBASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Smco4Q9JIS3 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Gm13474-201ENSMUST00000122466 815 ntBASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Gm20049-201ENSMUST00000219950 730 ntBASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Smco4Q9JIS3 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Otx2os1-204ENSMUST00000227221 751 ntBASIC11.36□□□□□ -0.59
Smco4Q9JIS3 AC114585.2-202ENSMUST00000228094 426 ntBASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Smco4Q9JIS3 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms