Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Gm8810-201ENSMUST00000172895 754 ntBASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Gm44364-201ENSMUST00000198368 141 ntBASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Nkx2-4Q9EQM3 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Gm37008-201ENSMUST00000195712 319 ntBASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nkx2-4Q9EQM3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Gm13342-201ENSMUST00000121055 207 ntBASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Mir5132-201ENSMUST00000175166 71 ntBASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Gm8927-201ENSMUST00000181978 981 ntBASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Gm27331-201ENSMUST00000183705 60 ntBASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Gm38223-201ENSMUST00000194484 695 ntBASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Gm3222-201ENSMUST00000071282 990 ntBASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nkx2-4Q9EQM3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Gm22018-201ENSMUST00000104357 131 ntBASIC14.47□□□□□ -0.09
Nkx2-4Q9EQM3 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms