Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdc40Q9DC48 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Gm12151-201ENSMUST00000121374 290 ntBASIC13.23□□□□□ -0.29
Cdc40Q9DC48 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cdc40Q9DC48 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Gm27618-201ENSMUST00000183671 60 ntBASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Gm45098-201ENSMUST00000207179 657 ntBASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdc40Q9DC48 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdc40Q9DC48 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdc40Q9DC48 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.21□□□□□ -0.29
Cdc40Q9DC48 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Cdc40Q9DC48 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cdc40Q9DC48 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdc40Q9DC48 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdc40Q9DC48 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdc40Q9DC48 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cdc40Q9DC48 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdc40Q9DC48 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdc40Q9DC48 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Cdc40Q9DC48 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdc40Q9DC48 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cdc40Q9DC48 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdc40Q9DC48 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdc40Q9DC48 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.21□□□□□ -0.29
Cdc40Q9DC48 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdc40Q9DC48 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms