Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Chmp2aQ9DB34 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Gm6222-201ENSMUST00000120787 396 ntBASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.86□□□□□ -0.03
Chmp2aQ9DB34 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Gm14042-201ENSMUST00000120139 833 ntBASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2aQ9DB34 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2aQ9DB34 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2aQ9DB34 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2aQ9DB34 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2aQ9DB34 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2aQ9DB34 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2aQ9DB34 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2aQ9DB34 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2aQ9DB34 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.84□□□□□ -0.03
Chmp2aQ9DB34 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2aQ9DB34 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2aQ9DB34 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.84□□□□□ -0.03
Chmp2aQ9DB34 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.84□□□□□ -0.03
Chmp2aQ9DB34 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2aQ9DB34 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2aQ9DB34 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.84□□□□□ -0.03
Chmp2aQ9DB34 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.84□□□□□ -0.03
Chmp2aQ9DB34 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2aQ9DB34 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2aQ9DB34 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms