Protein–RNA interactions for Protein: Q9D548

Zcchc13, Cellular nucleic acid binding protein 2, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc13Q9D548 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Zcchc13Q9D548 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Zcchc13Q9D548 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC9.05□□□□□ -0.96
Zcchc13Q9D548 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC9.05□□□□□ -0.96
Zcchc13Q9D548 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Zcchc13Q9D548 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Zcchc13Q9D548 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC9.05□□□□□ -0.96
Zcchc13Q9D548 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Zcchc13Q9D548 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Zcchc13Q9D548 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Zcchc13Q9D548 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Zcchc13Q9D548 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Zcchc13Q9D548 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Zcchc13Q9D548 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Zcchc13Q9D548 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Zcchc13Q9D548 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC9.05□□□□□ -0.96
Zcchc13Q9D548 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Zcchc13Q9D548 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Zcchc13Q9D548 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Zcchc13Q9D548 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Zcchc13Q9D548 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Zcchc13Q9D548 Gm9109-201ENSMUST00000120254 1405 ntBASIC9.05□□□□□ -0.96
Zcchc13Q9D548 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Zcchc13Q9D548 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Zcchc13Q9D548 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Zcchc13Q9D548 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Zcchc13Q9D548 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Zcchc13Q9D548 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Zcchc13Q9D548 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Gm21451-201ENSMUST00000111062 2775 ntBASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Gm37019-201ENSMUST00000192133 2134 ntBASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Gm13823-201ENSMUST00000119930 345 ntBASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Gm8584-201ENSMUST00000171982 758 ntBASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Gm5312-201ENSMUST00000203728 547 ntBASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Gm45453-201ENSMUST00000211758 853 ntBASIC9.04□□□□□ -0.96
Zcchc13Q9D548 AC121598.1-201ENSMUST00000228224 1019 ntBASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Zcchc13Q9D548 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Zcchc13Q9D548 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Zcchc13Q9D548 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Zcchc13Q9D548 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Zcchc13Q9D548 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Zcchc13Q9D548 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC9.03□□□□□ -0.96
Zcchc13Q9D548 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Zcchc13Q9D548 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Zcchc13Q9D548 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Zcchc13Q9D548 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC9.03□□□□□ -0.96
Zcchc13Q9D548 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Zcchc13Q9D548 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Zcchc13Q9D548 Nupl1-207ENSMUST00000225311 2475 ntBASIC9.03□□□□□ -0.96
Zcchc13Q9D548 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC9.03□□□□□ -0.96
Zcchc13Q9D548 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Zcchc13Q9D548 Gm5566-201ENSMUST00000116118 459 ntBASIC9.03□□□□□ -0.96
Zcchc13Q9D548 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Zcchc13Q9D548 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC9.03□□□□□ -0.96
Zcchc13Q9D548 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms