Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 AC159106.1-201ENSMUST00000224421 690 ntBASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Gm45011-201ENSMUST00000207620 2297 ntBASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Mrpl55Q9CZ83 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Gm11185-201ENSMUST00000117732 1007 ntBASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Gm2756-201ENSMUST00000195851 400 ntBASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 AC084391.1-201ENSMUST00000200651 141 ntBASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 AC090659.1-201ENSMUST00000224334 768 ntBASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 AC131709.1-201ENSMUST00000224731 1180 ntBASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Gm11873-201ENSMUST00000117877 1304 ntBASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Mrpl55Q9CZ83 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms