Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm12350-201ENSMUST00000121208 462 ntBASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Gm18733-201ENSMUST00000173950 856 ntBASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Gm27300-201ENSMUST00000184085 97 ntBASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Gm27335-201ENSMUST00000184758 97 ntBASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.44□□□□□ -0.26
Ska1Q9CPV1 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ska1Q9CPV1 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ska1Q9CPV1 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.42□□□□□ -0.26
Ska1Q9CPV1 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms