Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Krt88Q9CPR6 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Krt88Q9CPR6 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Krt88Q9CPR6 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Krt88Q9CPR6 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.35
Krt88Q9CPR6 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Krt88Q9CPR6 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.82□□□□□ -0.36
Krt88Q9CPR6 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Krt88Q9CPR6 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Gm25990-201ENSMUST00000102440 86 ntBASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms