Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh23Q99PF4 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdh23Q99PF4 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdh23Q99PF4 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh23Q99PF4 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh23Q99PF4 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh23Q99PF4 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh23Q99PF4 Mir1943-201ENSMUST00000158276 73 ntBASIC14.18□□□□□ -0.14
Cdh23Q99PF4 Gm18027-201ENSMUST00000218947 619 ntBASIC14.18□□□□□ -0.14
Cdh23Q99PF4 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh23Q99PF4 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh23Q99PF4 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh23Q99PF4 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh23Q99PF4 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh23Q99PF4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh23Q99PF4 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh23Q99PF4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Cdh23Q99PF4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh23Q99PF4 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC14.18□□□□□ -0.14
Cdh23Q99PF4 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.18□□□□□ -0.14
Cdh23Q99PF4 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh23Q99PF4 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh23Q99PF4 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh23Q99PF4 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh23Q99PF4 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Gm27772-201ENSMUST00000184900 187 ntBASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Gm10608-202ENSMUST00000213924 676 ntBASIC14.17□□□□□ -0.14
Cdh23Q99PF4 D9Wsu149-201ENSMUST00000214169 594 ntBASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Itm2b-204ENSMUST00000228637 783 ntBASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh23Q99PF4 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Gm13385-201ENSMUST00000121089 220 ntBASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Gm8927-201ENSMUST00000181978 981 ntBASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Gm37489-201ENSMUST00000191883 159 ntBASIC14.16□□□□□ -0.14
Cdh23Q99PF4 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh23Q99PF4 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh23Q99PF4 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Gm4986-201ENSMUST00000119731 549 ntBASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Gm12882-201ENSMUST00000121696 517 ntBASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Gm15370-201ENSMUST00000117158 253 ntBASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.16□□□□□ -0.14
Cdh23Q99PF4 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh23Q99PF4 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh23Q99PF4 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.15□□□□□ -0.14
Cdh23Q99PF4 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh23Q99PF4 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms