Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh4Q99MT2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Gm25948-201ENSMUST00000175334 112 ntBASIC13.88□□□□□ -0.19
Msh4Q99MT2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Gm38225-201ENSMUST00000194001 393 ntBASIC13.88□□□□□ -0.19
Msh4Q99MT2 Gm10253-201ENSMUST00000194270 940 ntBASIC13.88□□□□□ -0.19
Msh4Q99MT2 Gm7774-201ENSMUST00000200064 533 ntBASIC13.88□□□□□ -0.19
Msh4Q99MT2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh4Q99MT2 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.88□□□□□ -0.19
Msh4Q99MT2 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Msh4Q99MT2 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.88□□□□□ -0.19
Msh4Q99MT2 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Gm15920-201ENSMUST00000118998 402 ntBASIC13.87□□□□□ -0.19
Msh4Q99MT2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh4Q99MT2 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.87□□□□□ -0.19
Msh4Q99MT2 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.87□□□□□ -0.19
Msh4Q99MT2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.87□□□□□ -0.19
Msh4Q99MT2 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh4Q99MT2 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh4Q99MT2 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh4Q99MT2 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh4Q99MT2 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Msh4Q99MT2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh4Q99MT2 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.86□□□□□ -0.19
Msh4Q99MT2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh4Q99MT2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh4Q99MT2 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.86□□□□□ -0.19
Msh4Q99MT2 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh4Q99MT2 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.86□□□□□ -0.19
Msh4Q99MT2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.86□□□□□ -0.19
Msh4Q99MT2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.86□□□□□ -0.19
Msh4Q99MT2 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Msh4Q99MT2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh4Q99MT2 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.86□□□□□ -0.19
Msh4Q99MT2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.86□□□□□ -0.19
Msh4Q99MT2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh4Q99MT2 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.86□□□□□ -0.19
Msh4Q99MT2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh4Q99MT2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh4Q99MT2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh4Q99MT2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Msh4Q99MT2 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Msh4Q99MT2 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh4Q99MT2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh4Q99MT2 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh4Q99MT2 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Msh4Q99MT2 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh4Q99MT2 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh4Q99MT2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh4Q99MT2 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Msh4Q99MT2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh4Q99MT2 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msh4Q99MT2 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms