Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf1Q99LC2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Gm27486-201ENSMUST00000184923 80 ntBASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Gm5279-201ENSMUST00000199575 745 ntBASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf1Q99LC2 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf1Q99LC2 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Gm45784-201ENSMUST00000188360 142 ntBASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cstf1Q99LC2 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Gm8749-201ENSMUST00000117737 331 ntBASIC14.17□□□□□ -0.14
Cstf1Q99LC2 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Gm37424-201ENSMUST00000191727 561 ntBASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cstf1Q99LC2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms