Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc4Q99J62 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc4Q99J62 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rfc4Q99J62 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rfc4Q99J62 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Rfc4Q99J62 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rfc4Q99J62 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rfc4Q99J62 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc4Q99J62 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Rfc4Q99J62 Gm12390-201ENSMUST00000117897 397 ntBASIC16.33■□□□□ 0.2
Rfc4Q99J62 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc4Q99J62 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.33■□□□□ 0.2
Rfc4Q99J62 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc4Q99J62 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc4Q99J62 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc4Q99J62 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rfc4Q99J62 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc4Q99J62 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc4Q99J62 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Rfc4Q99J62 AC131068.2-201ENSMUST00000226175 1453 ntBASIC16.33■□□□□ 0.2
Rfc4Q99J62 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Rfc4Q99J62 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc4Q99J62 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc4Q99J62 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc4Q99J62 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc4Q99J62 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc4Q99J62 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc4Q99J62 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc4Q99J62 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Gm8835-201ENSMUST00000173096 1169 ntBASIC16.32■□□□□ 0.2
Rfc4Q99J62 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc4Q99J62 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rfc4Q99J62 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.31■□□□□ 0.2
Rfc4Q99J62 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc4Q99J62 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc4Q99J62 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rfc4Q99J62 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc4Q99J62 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Rfc4Q99J62 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc4Q99J62 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc4Q99J62 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc4Q99J62 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.31■□□□□ 0.2
Rfc4Q99J62 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc4Q99J62 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc4Q99J62 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc4Q99J62 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.31■□□□□ 0.2
Rfc4Q99J62 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc4Q99J62 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc4Q99J62 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc4Q99J62 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rfc4Q99J62 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc4Q99J62 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.31■□□□□ 0.2
Rfc4Q99J62 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc4Q99J62 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc4Q99J62 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc4Q99J62 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc4Q99J62 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.31■□□□□ 0.2
Rfc4Q99J62 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc4Q99J62 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc4Q99J62 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc4Q99J62 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc4Q99J62 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rfc4Q99J62 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfc4Q99J62 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rfc4Q99J62 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfc4Q99J62 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfc4Q99J62 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfc4Q99J62 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfc4Q99J62 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfc4Q99J62 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfc4Q99J62 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfc4Q99J62 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Rfc4Q99J62 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms