Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha3Q91Y16 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdha3Q91Y16 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.89□□□□□ -0.03
Pcdha3Q91Y16 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha3Q91Y16 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdha3Q91Y16 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Gm8410-201ENSMUST00000117225 605 ntBASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Gm6415-201ENSMUST00000118488 348 ntBASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdha3Q91Y16 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Pcdha3Q91Y16 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 Gm10275-202ENSMUST00000168697 495 ntBASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 Gm25144-201ENSMUST00000179561 110 ntBASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 Gm25352-201ENSMUST00000179815 110 ntBASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 Gm10275-201ENSMUST00000092620 635 ntBASIC14.86□□□□□ -0.03
Pcdha3Q91Y16 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms