Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb3Q91XZ7 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.27□□□□□ -0.12
Pcdhb3Q91XZ7 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.27□□□□□ -0.12
Pcdhb3Q91XZ7 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb3Q91XZ7 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pcdhb3Q91XZ7 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.27□□□□□ -0.13
Pcdhb3Q91XZ7 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb3Q91XZ7 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.27□□□□□ -0.13
Pcdhb3Q91XZ7 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb3Q91XZ7 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.27□□□□□ -0.13
Pcdhb3Q91XZ7 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.27□□□□□ -0.13
Pcdhb3Q91XZ7 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.27□□□□□ -0.13
Pcdhb3Q91XZ7 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb3Q91XZ7 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pcdhb3Q91XZ7 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Pcdhb3Q91XZ7 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb3Q91XZ7 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb3Q91XZ7 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pcdhb3Q91XZ7 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb3Q91XZ7 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb3Q91XZ7 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb3Q91XZ7 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdhb3Q91XZ7 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb3Q91XZ7 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Pcdhb3Q91XZ7 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb3Q91XZ7 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Gm11779-201ENSMUST00000118541 368 ntBASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Gm14140-201ENSMUST00000119999 995 ntBASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Gm14913-201ENSMUST00000120011 1093 ntBASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Gm27628-201ENSMUST00000184911 107 ntBASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Celf4-206ENSMUST00000224553 1729 ntBASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb3Q91XZ7 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Gm11764-201ENSMUST00000120221 623 ntBASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Gm15467-201ENSMUST00000120582 445 ntBASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Gm27646-201ENSMUST00000183989 110 ntBASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhb3Q91XZ7 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms