Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb6Q91XZ4 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb6Q91XZ4 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Mir449b-201ENSMUST00000104833 80 ntBASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Gm12428-201ENSMUST00000119844 727 ntBASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Gm5779-201ENSMUST00000218467 910 ntBASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb6Q91XZ4 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Gm28630-201ENSMUST00000187806 498 ntBASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Mir125a-201ENSMUST00000083545 68 ntBASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb6Q91XZ4 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb6Q91XZ4 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb6Q91XZ4 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb6Q91XZ4 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb6Q91XZ4 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb6Q91XZ4 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb6Q91XZ4 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb6Q91XZ4 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhb6Q91XZ4 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhb6Q91XZ4 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.59□□□□□ -0.07
Pcdhb6Q91XZ4 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb6Q91XZ4 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb6Q91XZ4 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.59□□□□□ -0.07
Pcdhb6Q91XZ4 Gm7774-201ENSMUST00000200064 533 ntBASIC14.59□□□□□ -0.07
Pcdhb6Q91XZ4 Gm16476-201ENSMUST00000221544 139 ntBASIC14.59□□□□□ -0.07
Pcdhb6Q91XZ4 Dupd1-202ENSMUST00000224735 548 ntBASIC14.59□□□□□ -0.07
Pcdhb6Q91XZ4 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb6Q91XZ4 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdhb6Q91XZ4 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb6Q91XZ4 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb6Q91XZ4 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb6Q91XZ4 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb6Q91XZ4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms