Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trex1Q91XB0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.23■□□□□ 0.19
Trex1Q91XB0 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trex1Q91XB0 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trex1Q91XB0 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trex1Q91XB0 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Gm15824-201ENSMUST00000119516 955 ntBASIC16.22■□□□□ 0.19
Trex1Q91XB0 Gm13385-201ENSMUST00000121089 220 ntBASIC16.22■□□□□ 0.19
Trex1Q91XB0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.22■□□□□ 0.19
Trex1Q91XB0 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Gm43094-201ENSMUST00000196549 921 ntBASIC16.22■□□□□ 0.19
Trex1Q91XB0 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.22■□□□□ 0.19
Trex1Q91XB0 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trex1Q91XB0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trex1Q91XB0 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trex1Q91XB0 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trex1Q91XB0 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trex1Q91XB0 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.21■□□□□ 0.19
Trex1Q91XB0 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trex1Q91XB0 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.21■□□□□ 0.19
Trex1Q91XB0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trex1Q91XB0 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Trex1Q91XB0 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trex1Q91XB0 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trex1Q91XB0 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trex1Q91XB0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.21■□□□□ 0.19
Trex1Q91XB0 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trex1Q91XB0 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.21■□□□□ 0.19
Trex1Q91XB0 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC16.21■□□□□ 0.19
Trex1Q91XB0 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trex1Q91XB0 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trex1Q91XB0 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.21■□□□□ 0.19
Trex1Q91XB0 Gm8927-201ENSMUST00000181978 981 ntBASIC16.21■□□□□ 0.19
Trex1Q91XB0 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.21■□□□□ 0.19
Trex1Q91XB0 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trex1Q91XB0 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.21■□□□□ 0.19
Trex1Q91XB0 Gm18062-201ENSMUST00000208020 547 ntBASIC16.21■□□□□ 0.19
Trex1Q91XB0 Gm18055-201ENSMUST00000208254 547 ntBASIC16.21■□□□□ 0.19
Trex1Q91XB0 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Trex1Q91XB0 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trex1Q91XB0 Gm3222-201ENSMUST00000071282 990 ntBASIC16.21■□□□□ 0.19
Trex1Q91XB0 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trex1Q91XB0 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trex1Q91XB0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trex1Q91XB0 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trex1Q91XB0 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Trex1Q91XB0 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trex1Q91XB0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trex1Q91XB0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trex1Q91XB0 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.2■□□□□ 0.18
Trex1Q91XB0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trex1Q91XB0 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trex1Q91XB0 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trex1Q91XB0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trex1Q91XB0 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trex1Q91XB0 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Trex1Q91XB0 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trex1Q91XB0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trex1Q91XB0 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.2■□□□□ 0.18
Trex1Q91XB0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trex1Q91XB0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trex1Q91XB0 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.2■□□□□ 0.18
Trex1Q91XB0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trex1Q91XB0 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trex1Q91XB0 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trex1Q91XB0 Gm27892-201ENSMUST00000185017 106 ntBASIC16.2■□□□□ 0.18
Trex1Q91XB0 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trex1Q91XB0 Gm19078-201ENSMUST00000206311 727 ntBASIC16.2■□□□□ 0.18
Trex1Q91XB0 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trex1Q91XB0 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms