Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.34■□□□□ 0.21
Ddx41Q91VN6 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ddx41Q91VN6 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Ddx41Q91VN6 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx41Q91VN6 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx41Q91VN6 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx41Q91VN6 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.34■□□□□ 0.21
Ddx41Q91VN6 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.34■□□□□ 0.21
Ddx41Q91VN6 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx41Q91VN6 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx41Q91VN6 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.34■□□□□ 0.21
Ddx41Q91VN6 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx41Q91VN6 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx41Q91VN6 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ddx41Q91VN6 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx41Q91VN6 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx41Q91VN6 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ddx41Q91VN6 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ddx41Q91VN6 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ddx41Q91VN6 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ddx41Q91VN6 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ddx41Q91VN6 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ddx41Q91VN6 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx41Q91VN6 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx41Q91VN6 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.33■□□□□ 0.2
Ddx41Q91VN6 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx41Q91VN6 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.33■□□□□ 0.2
Ddx41Q91VN6 Gm8749-201ENSMUST00000117737 331 ntBASIC16.33■□□□□ 0.2
Ddx41Q91VN6 Gm9719-201ENSMUST00000162765 543 ntBASIC16.33■□□□□ 0.2
Ddx41Q91VN6 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.33■□□□□ 0.2
Ddx41Q91VN6 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.33■□□□□ 0.2
Ddx41Q91VN6 Gm27680-201ENSMUST00000184192 160 ntBASIC16.33■□□□□ 0.2
Ddx41Q91VN6 Gm2451-201ENSMUST00000199447 999 ntBASIC16.33■□□□□ 0.2
Ddx41Q91VN6 Gm10290-201ENSMUST00000200451 999 ntBASIC16.33■□□□□ 0.2
Ddx41Q91VN6 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx41Q91VN6 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx41Q91VN6 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx41Q91VN6 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ddx41Q91VN6 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Ddx41Q91VN6 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx41Q91VN6 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx41Q91VN6 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx41Q91VN6 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx41Q91VN6 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx41Q91VN6 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx41Q91VN6 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx41Q91VN6 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.33■□□□□ 0.2
Ddx41Q91VN6 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx41Q91VN6 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC16.32■□□□□ 0.2
Ddx41Q91VN6 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ddx41Q91VN6 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx41Q91VN6 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx41Q91VN6 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.32■□□□□ 0.2
Ddx41Q91VN6 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.32■□□□□ 0.2
Ddx41Q91VN6 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx41Q91VN6 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx41Q91VN6 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.32■□□□□ 0.2
Ddx41Q91VN6 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ddx41Q91VN6 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx41Q91VN6 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx41Q91VN6 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx41Q91VN6 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.32■□□□□ 0.2
Ddx41Q91VN6 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ddx41Q91VN6 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.32■□□□□ 0.2
Ddx41Q91VN6 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx41Q91VN6 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx41Q91VN6 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx41Q91VN6 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx41Q91VN6 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx41Q91VN6 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx41Q91VN6 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx41Q91VN6 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ddx41Q91VN6 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx41Q91VN6 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ddx41Q91VN6 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx41Q91VN6 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ddx41Q91VN6 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Gm24543-201ENSMUST00000103867 82 ntBASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Gm44344-201ENSMUST00000200287 129 ntBASIC16.31■□□□□ 0.2
Ddx41Q91VN6 Gm7775-201ENSMUST00000218871 853 ntBASIC16.31■□□□□ 0.2
Ddx41Q91VN6 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms