Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx1Q91V10 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx1Q91V10 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx1Q91V10 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.05□□□□□ -0.16
Vsx1Q91V10 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vsx1Q91V10 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.05□□□□□ -0.16
Vsx1Q91V10 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx1Q91V10 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx1Q91V10 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Gm37424-201ENSMUST00000191727 561 ntBASIC14.04□□□□□ -0.16
Vsx1Q91V10 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.04□□□□□ -0.16
Vsx1Q91V10 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx1Q91V10 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.04□□□□□ -0.16
Vsx1Q91V10 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx1Q91V10 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.04□□□□□ -0.16
Vsx1Q91V10 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vsx1Q91V10 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Gm17420-201ENSMUST00000164753 153 ntBASIC14.03□□□□□ -0.16
Vsx1Q91V10 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.03□□□□□ -0.16
Vsx1Q91V10 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.03□□□□□ -0.16
Vsx1Q91V10 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.03□□□□□ -0.16
Vsx1Q91V10 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.03□□□□□ -0.16
Vsx1Q91V10 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx1Q91V10 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx1Q91V10 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vsx1Q91V10 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vsx1Q91V10 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vsx1Q91V10 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vsx1Q91V10 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vsx1Q91V10 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vsx1Q91V10 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vsx1Q91V10 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vsx1Q91V10 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.02□□□□□ -0.16
Vsx1Q91V10 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vsx1Q91V10 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vsx1Q91V10 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vsx1Q91V10 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.02□□□□□ -0.16
Vsx1Q91V10 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vsx1Q91V10 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vsx1Q91V10 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms