Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Odf4Q8VI88 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Odf4Q8VI88 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Odf4Q8VI88 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Odf4Q8VI88 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Odf4Q8VI88 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Odf4Q8VI88 Gm5312-201ENSMUST00000203728 547 ntBASIC12.78□□□□□ -0.36
Odf4Q8VI88 Gm45612-201ENSMUST00000211320 160 ntBASIC12.78□□□□□ -0.36
Odf4Q8VI88 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Odf4Q8VI88 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Odf4Q8VI88 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Odf4Q8VI88 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Odf4Q8VI88 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Odf4Q8VI88 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Odf4Q8VI88 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Odf4Q8VI88 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.78□□□□□ -0.36
Odf4Q8VI88 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Odf4Q8VI88 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Odf4Q8VI88 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Odf4Q8VI88 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Odf4Q8VI88 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Odf4Q8VI88 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Odf4Q8VI88 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Odf4Q8VI88 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.78□□□□□ -0.36
Odf4Q8VI88 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Odf4Q8VI88 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Odf4Q8VI88 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Odf4Q8VI88 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Odf4Q8VI88 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Odf4Q8VI88 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Odf4Q8VI88 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Odf4Q8VI88 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Odf4Q8VI88 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Odf4Q8VI88 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
Odf4Q8VI88 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Odf4Q8VI88 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.77□□□□□ -0.36
Odf4Q8VI88 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Odf4Q8VI88 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Odf4Q8VI88 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Odf4Q8VI88 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.77□□□□□ -0.37
Odf4Q8VI88 Gm13616-201ENSMUST00000120600 222 ntBASIC12.77□□□□□ -0.37
Odf4Q8VI88 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.77□□□□□ -0.37
Odf4Q8VI88 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Odf4Q8VI88 Gm23547-201ENSMUST00000158210 271 ntBASIC12.77□□□□□ -0.37
Odf4Q8VI88 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Odf4Q8VI88 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.77□□□□□ -0.37
Odf4Q8VI88 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.77□□□□□ -0.37
Odf4Q8VI88 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Odf4Q8VI88 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Odf4Q8VI88 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Odf4Q8VI88 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.77□□□□□ -0.37
Odf4Q8VI88 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.77□□□□□ -0.37
Odf4Q8VI88 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.77□□□□□ -0.37
Odf4Q8VI88 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.77□□□□□ -0.37
Odf4Q8VI88 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.77□□□□□ -0.37
Odf4Q8VI88 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.77□□□□□ -0.37
Odf4Q8VI88 Gm10154-201ENSMUST00000084445 354 ntBASIC12.77□□□□□ -0.37
Odf4Q8VI88 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.77□□□□□ -0.37
Odf4Q8VI88 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Odf4Q8VI88 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Odf4Q8VI88 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Odf4Q8VI88 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Odf4Q8VI88 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Odf4Q8VI88 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Odf4Q8VI88 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Odf4Q8VI88 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Odf4Q8VI88 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Odf4Q8VI88 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Odf4Q8VI88 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Odf4Q8VI88 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.77□□□□□ -0.37
Odf4Q8VI88 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Odf4Q8VI88 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Odf4Q8VI88 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Odf4Q8VI88 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
Odf4Q8VI88 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Odf4Q8VI88 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Odf4Q8VI88 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Odf4Q8VI88 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.76□□□□□ -0.37
Odf4Q8VI88 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Odf4Q8VI88 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.76□□□□□ -0.37
Odf4Q8VI88 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Odf4Q8VI88 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Odf4Q8VI88 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Odf4Q8VI88 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.76□□□□□ -0.37
Odf4Q8VI88 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Odf4Q8VI88 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Odf4Q8VI88 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Odf4Q8VI88 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Odf4Q8VI88 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Odf4Q8VI88 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.76□□□□□ -0.37
Odf4Q8VI88 Gm9385-201ENSMUST00000117563 472 ntBASIC12.76□□□□□ -0.37
Odf4Q8VI88 Gm14057-201ENSMUST00000120631 482 ntBASIC12.76□□□□□ -0.37
Odf4Q8VI88 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Odf4Q8VI88 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Odf4Q8VI88 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.76□□□□□ -0.37
Odf4Q8VI88 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Odf4Q8VI88 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Odf4Q8VI88 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Odf4Q8VI88 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Odf4Q8VI88 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms