Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sf3a1Q8K4Z5 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Sf3a1Q8K4Z5 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Sf3a1Q8K4Z5 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Sf3a1Q8K4Z5 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sf3a1Q8K4Z5 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sf3a1Q8K4Z5 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Sf3a1Q8K4Z5 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Sf3a1Q8K4Z5 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.41■□□□□ 0.38
Sf3a1Q8K4Z5 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.41■□□□□ 0.38
Sf3a1Q8K4Z5 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.41■□□□□ 0.38
Sf3a1Q8K4Z5 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sf3a1Q8K4Z5 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC17.41■□□□□ 0.38
Sf3a1Q8K4Z5 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Sf3a1Q8K4Z5 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Sf3a1Q8K4Z5 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sf3a1Q8K4Z5 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Sf3a1Q8K4Z5 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sf3a1Q8K4Z5 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Sf3a1Q8K4Z5 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sf3a1Q8K4Z5 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Gm13223-201ENSMUST00000118609 747 ntBASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 AA543401-201ENSMUST00000164248 1269 ntBASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Shd-206ENSMUST00000225145 998 ntBASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Mir125a-201ENSMUST00000083545 68 ntBASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sf3a1Q8K4Z5 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Sf3a1Q8K4Z5 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sf3a1Q8K4Z5 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Sf3a1Q8K4Z5 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sf3a1Q8K4Z5 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Sf3a1Q8K4Z5 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Sf3a1Q8K4Z5 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Sf3a1Q8K4Z5 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Sf3a1Q8K4Z5 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sf3a1Q8K4Z5 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Sf3a1Q8K4Z5 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Sf3a1Q8K4Z5 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.39■□□□□ 0.37
Sf3a1Q8K4Z5 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Sf3a1Q8K4Z5 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.39■□□□□ 0.37
Sf3a1Q8K4Z5 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sf3a1Q8K4Z5 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sf3a1Q8K4Z5 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sf3a1Q8K4Z5 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.39■□□□□ 0.37
Sf3a1Q8K4Z5 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sf3a1Q8K4Z5 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sf3a1Q8K4Z5 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sf3a1Q8K4Z5 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sf3a1Q8K4Z5 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3a1Q8K4Z5 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3a1Q8K4Z5 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3a1Q8K4Z5 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3a1Q8K4Z5 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Sf3a1Q8K4Z5 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Sf3a1Q8K4Z5 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3a1Q8K4Z5 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3a1Q8K4Z5 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3a1Q8K4Z5 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3a1Q8K4Z5 Gm15957-201ENSMUST00000118893 974 ntBASIC17.38■□□□□ 0.37
Sf3a1Q8K4Z5 Mir1897-201ENSMUST00000122581 272 ntBASIC17.38■□□□□ 0.37
Sf3a1Q8K4Z5 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3a1Q8K4Z5 Gm6888-201ENSMUST00000221983 706 ntBASIC17.38■□□□□ 0.37
Sf3a1Q8K4Z5 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.38■□□□□ 0.37
Sf3a1Q8K4Z5 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Sf3a1Q8K4Z5 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3a1Q8K4Z5 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3a1Q8K4Z5 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Sf3a1Q8K4Z5 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3a1Q8K4Z5 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3a1Q8K4Z5 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sf3a1Q8K4Z5 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms