Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CopaQ8CIE6 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CopaQ8CIE6 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.54□□□□□ -0.08
CopaQ8CIE6 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Gm13015-201ENSMUST00000118674 204 ntBASIC14.54□□□□□ -0.08
CopaQ8CIE6 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Gm27618-201ENSMUST00000183671 60 ntBASIC14.54□□□□□ -0.08
CopaQ8CIE6 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.54□□□□□ -0.08
CopaQ8CIE6 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.54□□□□□ -0.08
CopaQ8CIE6 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CopaQ8CIE6 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CopaQ8CIE6 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.53□□□□□ -0.08
CopaQ8CIE6 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.53□□□□□ -0.08
CopaQ8CIE6 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CopaQ8CIE6 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CopaQ8CIE6 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CopaQ8CIE6 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CopaQ8CIE6 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CopaQ8CIE6 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CopaQ8CIE6 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CopaQ8CIE6 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.53□□□□□ -0.08
CopaQ8CIE6 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.53□□□□□ -0.08
CopaQ8CIE6 Gm13223-201ENSMUST00000118609 747 ntBASIC14.53□□□□□ -0.08
CopaQ8CIE6 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.53□□□□□ -0.08
CopaQ8CIE6 Gm29541-201ENSMUST00000191351 678 ntBASIC14.53□□□□□ -0.08
CopaQ8CIE6 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.53□□□□□ -0.08
CopaQ8CIE6 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CopaQ8CIE6 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CopaQ8CIE6 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CopaQ8CIE6 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.53□□□□□ -0.08
CopaQ8CIE6 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CopaQ8CIE6 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CopaQ8CIE6 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.53□□□□□ -0.08
CopaQ8CIE6 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CopaQ8CIE6 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.53□□□□□ -0.08
CopaQ8CIE6 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CopaQ8CIE6 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CopaQ8CIE6 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CopaQ8CIE6 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CopaQ8CIE6 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CopaQ8CIE6 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
CopaQ8CIE6 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CopaQ8CIE6 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.08
CopaQ8CIE6 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CopaQ8CIE6 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CopaQ8CIE6 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CopaQ8CIE6 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CopaQ8CIE6 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CopaQ8CIE6 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms