Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rsph6aQ8CDR2 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC18.49■□□□□ 0.55
Rsph6aQ8CDR2 Gm7558-201ENSMUST00000193221 1165 ntBASIC18.49■□□□□ 0.55
Rsph6aQ8CDR2 Gm7430-201ENSMUST00000193824 1144 ntBASIC18.49■□□□□ 0.55
Rsph6aQ8CDR2 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC18.49■□□□□ 0.55
Rsph6aQ8CDR2 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rsph6aQ8CDR2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rsph6aQ8CDR2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rsph6aQ8CDR2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rsph6aQ8CDR2 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rsph6aQ8CDR2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rsph6aQ8CDR2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rsph6aQ8CDR2 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rsph6aQ8CDR2 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rsph6aQ8CDR2 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rsph6aQ8CDR2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rsph6aQ8CDR2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rsph6aQ8CDR2 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Rsph6aQ8CDR2 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rsph6aQ8CDR2 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rsph6aQ8CDR2 Gm42471-201ENSMUST00000201457 1865 ntBASIC18.48■□□□□ 0.55
Rsph6aQ8CDR2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rsph6aQ8CDR2 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rsph6aQ8CDR2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC18.48■□□□□ 0.55
Rsph6aQ8CDR2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rsph6aQ8CDR2 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rsph6aQ8CDR2 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rsph6aQ8CDR2 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rsph6aQ8CDR2 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rsph6aQ8CDR2 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rsph6aQ8CDR2 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rsph6aQ8CDR2 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC18.48■□□□□ 0.55
Rsph6aQ8CDR2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rsph6aQ8CDR2 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC18.48■□□□□ 0.55
Rsph6aQ8CDR2 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC18.48■□□□□ 0.55
Rsph6aQ8CDR2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rsph6aQ8CDR2 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rsph6aQ8CDR2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
Rsph6aQ8CDR2 Gm37411-201ENSMUST00000194180 2282 ntBASIC18.48■□□□□ 0.55
Rsph6aQ8CDR2 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Rsph6aQ8CDR2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 Gm11960-202ENSMUST00000181063 2858 ntBASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 Mir497b-201ENSMUST00000093601 125 ntBASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rsph6aQ8CDR2 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rsph6aQ8CDR2 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rsph6aQ8CDR2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rsph6aQ8CDR2 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rsph6aQ8CDR2 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC18.46■□□□□ 0.55
Rsph6aQ8CDR2 Gm13385-201ENSMUST00000121089 220 ntBASIC18.46■□□□□ 0.55
Rsph6aQ8CDR2 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rsph6aQ8CDR2 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC18.46■□□□□ 0.55
Rsph6aQ8CDR2 Mir7654-201ENSMUST00000185082 70 ntBASIC18.46■□□□□ 0.55
Rsph6aQ8CDR2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC18.46■□□□□ 0.55
Rsph6aQ8CDR2 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rsph6aQ8CDR2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rsph6aQ8CDR2 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rsph6aQ8CDR2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rsph6aQ8CDR2 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rsph6aQ8CDR2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rsph6aQ8CDR2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Rsph6aQ8CDR2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Rsph6aQ8CDR2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
Rsph6aQ8CDR2 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Rsph6aQ8CDR2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rsph6aQ8CDR2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rsph6aQ8CDR2 Gm38037-201ENSMUST00000192600 1624 ntBASIC18.45■□□□□ 0.54
Rsph6aQ8CDR2 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC18.45■□□□□ 0.54
Rsph6aQ8CDR2 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rsph6aQ8CDR2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rsph6aQ8CDR2 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rsph6aQ8CDR2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rsph6aQ8CDR2 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rsph6aQ8CDR2 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms