Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Lrif1Q8CDD9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lrif1Q8CDD9 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Gm8749-201ENSMUST00000117737 331 ntBASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Gm9726-201ENSMUST00000180321 678 ntBASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Gm45167-201ENSMUST00000208007 322 ntBASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lrif1Q8CDD9 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrif1Q8CDD9 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrif1Q8CDD9 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrif1Q8CDD9 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrif1Q8CDD9 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrif1Q8CDD9 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrif1Q8CDD9 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrif1Q8CDD9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lrif1Q8CDD9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lrif1Q8CDD9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.07□□□□□ -0.16
Lrif1Q8CDD9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrif1Q8CDD9 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.07□□□□□ -0.16
Lrif1Q8CDD9 Mir3113-201ENSMUST00000175478 76 ntBASIC14.07□□□□□ -0.16
Lrif1Q8CDD9 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lrif1Q8CDD9 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.07□□□□□ -0.16
Lrif1Q8CDD9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrif1Q8CDD9 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrif1Q8CDD9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrif1Q8CDD9 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lrif1Q8CDD9 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrif1Q8CDD9 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.07□□□□□ -0.16
Lrif1Q8CDD9 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrif1Q8CDD9 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrif1Q8CDD9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrif1Q8CDD9 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrif1Q8CDD9 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Lrif1Q8CDD9 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Lrif1Q8CDD9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Lrif1Q8CDD9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Gm6736-201ENSMUST00000166583 948 ntBASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms