Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.54■□□□□ 0.08
Prpf31Q8CCF0 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf31Q8CCF0 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf31Q8CCF0 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf31Q8CCF0 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf31Q8CCF0 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Prpf31Q8CCF0 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf31Q8CCF0 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Prpf31Q8CCF0 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf31Q8CCF0 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Prpf31Q8CCF0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf31Q8CCF0 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf31Q8CCF0 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.54■□□□□ 0.08
Prpf31Q8CCF0 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf31Q8CCF0 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf31Q8CCF0 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.54■□□□□ 0.08
Prpf31Q8CCF0 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf31Q8CCF0 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Prpf31Q8CCF0 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Prpf31Q8CCF0 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Prpf31Q8CCF0 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf31Q8CCF0 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf31Q8CCF0 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf31Q8CCF0 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf31Q8CCF0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Gm9522-201ENSMUST00000182394 926 ntBASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Gm20445-201ENSMUST00000061905 565 ntBASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf31Q8CCF0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf31Q8CCF0 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf31Q8CCF0 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf31Q8CCF0 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf31Q8CCF0 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf31Q8CCF0 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.52■□□□□ 0.08
Prpf31Q8CCF0 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf31Q8CCF0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf31Q8CCF0 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf31Q8CCF0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf31Q8CCF0 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf31Q8CCF0 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.52■□□□□ 0.08
Prpf31Q8CCF0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.52■□□□□ 0.08
Prpf31Q8CCF0 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.52■□□□□ 0.08
Prpf31Q8CCF0 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf31Q8CCF0 Gm6218-201ENSMUST00000219812 628 ntBASIC15.52■□□□□ 0.08
Prpf31Q8CCF0 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf31Q8CCF0 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf31Q8CCF0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prpf31Q8CCF0 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Prpf31Q8CCF0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Prpf31Q8CCF0 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Prpf31Q8CCF0 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Prpf31Q8CCF0 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Prpf31Q8CCF0 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Gm7488-201ENSMUST00000117148 684 ntBASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Gm12585-201ENSMUST00000117307 290 ntBASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Gm15393-201ENSMUST00000120499 219 ntBASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms