Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Ska3Q8C263 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska3Q8C263 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.4□□□□□ -0.26
Ska3Q8C263 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska3Q8C263 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.4□□□□□ -0.26
Ska3Q8C263 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ska3Q8C263 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska3Q8C263 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ska3Q8C263 Gm6222-201ENSMUST00000120787 396 ntBASIC13.4□□□□□ -0.26
Ska3Q8C263 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.4□□□□□ -0.26
Ska3Q8C263 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Ska3Q8C263 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ska3Q8C263 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska3Q8C263 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska3Q8C263 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska3Q8C263 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska3Q8C263 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska3Q8C263 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.4□□□□□ -0.26
Ska3Q8C263 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska3Q8C263 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Ska3Q8C263 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ska3Q8C263 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska3Q8C263 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska3Q8C263 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska3Q8C263 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ska3Q8C263 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
Ska3Q8C263 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska3Q8C263 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ska3Q8C263 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Ska3Q8C263 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.4□□□□□ -0.27
Ska3Q8C263 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska3Q8C263 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska3Q8C263 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska3Q8C263 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska3Q8C263 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ska3Q8C263 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.39□□□□□ -0.27
Ska3Q8C263 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.39□□□□□ -0.27
Ska3Q8C263 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska3Q8C263 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska3Q8C263 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska3Q8C263 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska3Q8C263 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ska3Q8C263 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska3Q8C263 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.39□□□□□ -0.27
Ska3Q8C263 Gm5566-201ENSMUST00000116118 459 ntBASIC13.39□□□□□ -0.27
Ska3Q8C263 Gm6415-201ENSMUST00000118488 348 ntBASIC13.39□□□□□ -0.27
Ska3Q8C263 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ska3Q8C263 Gm9719-201ENSMUST00000162765 543 ntBASIC13.39□□□□□ -0.27
Ska3Q8C263 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska3Q8C263 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska3Q8C263 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ska3Q8C263 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska3Q8C263 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska3Q8C263 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska3Q8C263 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska3Q8C263 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ska3Q8C263 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska3Q8C263 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska3Q8C263 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska3Q8C263 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ska3Q8C263 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ska3Q8C263 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska3Q8C263 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska3Q8C263 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ska3Q8C263 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska3Q8C263 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ska3Q8C263 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska3Q8C263 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ska3Q8C263 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.39□□□□□ -0.27
Ska3Q8C263 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ska3Q8C263 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ska3Q8C263 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ska3Q8C263 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ska3Q8C263 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ska3Q8C263 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ska3Q8C263 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ska3Q8C263 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ska3Q8C263 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ska3Q8C263 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ska3Q8C263 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ska3Q8C263 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Ska3Q8C263 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ska3Q8C263 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ska3Q8C263 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ska3Q8C263 Gm13616-201ENSMUST00000120600 222 ntBASIC13.38□□□□□ -0.27
Ska3Q8C263 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ska3Q8C263 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.38□□□□□ -0.27
Ska3Q8C263 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.38□□□□□ -0.27
Ska3Q8C263 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Ska3Q8C263 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.38□□□□□ -0.27
Ska3Q8C263 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ska3Q8C263 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ska3Q8C263 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ska3Q8C263 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.38□□□□□ -0.27
Ska3Q8C263 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Ska3Q8C263 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ska3Q8C263 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.38□□□□□ -0.27
Ska3Q8C263 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ska3Q8C263 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ska3Q8C263 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms