Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trub1Q8C0D0 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trub1Q8C0D0 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trub1Q8C0D0 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trub1Q8C0D0 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trub1Q8C0D0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trub1Q8C0D0 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trub1Q8C0D0 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trub1Q8C0D0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trub1Q8C0D0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trub1Q8C0D0 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trub1Q8C0D0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trub1Q8C0D0 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Gm45453-201ENSMUST00000211758 853 ntBASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trub1Q8C0D0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Gm6736-201ENSMUST00000166583 948 ntBASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Gm24158-201ENSMUST00000175263 71 ntBASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 AA619741-201ENSMUST00000195095 646 ntBASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Gm44608-201ENSMUST00000206827 855 ntBASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trub1Q8C0D0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trub1Q8C0D0 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trub1Q8C0D0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trub1Q8C0D0 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trub1Q8C0D0 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trub1Q8C0D0 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trub1Q8C0D0 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trub1Q8C0D0 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trub1Q8C0D0 Gm5566-201ENSMUST00000116118 459 ntBASIC14.66□□□□□ -0.06
Trub1Q8C0D0 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.66□□□□□ -0.06
Trub1Q8C0D0 Gm9719-201ENSMUST00000162765 543 ntBASIC14.66□□□□□ -0.06
Trub1Q8C0D0 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.66□□□□□ -0.06
Trub1Q8C0D0 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.66□□□□□ -0.06
Trub1Q8C0D0 Gm37935-201ENSMUST00000192012 982 ntBASIC14.66□□□□□ -0.06
Trub1Q8C0D0 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.66□□□□□ -0.06
Trub1Q8C0D0 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trub1Q8C0D0 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trub1Q8C0D0 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trub1Q8C0D0 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trub1Q8C0D0 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms