Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Usp47Q8BY87 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Usp47Q8BY87 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp47Q8BY87 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp47Q8BY87 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp47Q8BY87 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp47Q8BY87 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp47Q8BY87 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Usp47Q8BY87 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp47Q8BY87 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp47Q8BY87 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp47Q8BY87 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp47Q8BY87 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp47Q8BY87 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC19.97■□□□□ 0.79
Usp47Q8BY87 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Usp47Q8BY87 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp47Q8BY87 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Usp47Q8BY87 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp47Q8BY87 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Usp47Q8BY87 Gm38037-201ENSMUST00000192600 1624 ntBASIC19.97■□□□□ 0.79
Usp47Q8BY87 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp47Q8BY87 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp47Q8BY87 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
Usp47Q8BY87 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Usp47Q8BY87 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp47Q8BY87 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp47Q8BY87 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp47Q8BY87 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Usp47Q8BY87 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Usp47Q8BY87 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC19.96■□□□□ 0.79
Usp47Q8BY87 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC19.96■□□□□ 0.79
Usp47Q8BY87 Gm5745-201ENSMUST00000183748 313 ntBASIC19.96■□□□□ 0.79
Usp47Q8BY87 Gm29741-201ENSMUST00000192667 421 ntBASIC19.96■□□□□ 0.79
Usp47Q8BY87 Gm37917-201ENSMUST00000194711 392 ntBASIC19.96■□□□□ 0.79
Usp47Q8BY87 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Usp47Q8BY87 AC149294.4-201ENSMUST00000227870 882 ntBASIC19.96■□□□□ 0.79
Usp47Q8BY87 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp47Q8BY87 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp47Q8BY87 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp47Q8BY87 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC19.96■□□□□ 0.79
Usp47Q8BY87 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp47Q8BY87 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp47Q8BY87 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp47Q8BY87 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp47Q8BY87 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Usp47Q8BY87 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp47Q8BY87 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC19.96■□□□□ 0.79
Usp47Q8BY87 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp47Q8BY87 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Usp47Q8BY87 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
Usp47Q8BY87 Gm11557-201ENSMUST00000120200 1008 ntBASIC19.95■□□□□ 0.79
Usp47Q8BY87 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC19.95■□□□□ 0.79
Usp47Q8BY87 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC19.95■□□□□ 0.79
Usp47Q8BY87 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC19.95■□□□□ 0.79
Usp47Q8BY87 Gm8927-201ENSMUST00000181978 981 ntBASIC19.95■□□□□ 0.79
Usp47Q8BY87 Gm45668-201ENSMUST00000211271 493 ntBASIC19.95■□□□□ 0.79
Usp47Q8BY87 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC19.95■□□□□ 0.79
Usp47Q8BY87 Gm6180-201ENSMUST00000065243 498 ntBASIC19.95■□□□□ 0.79
Usp47Q8BY87 Gm3222-201ENSMUST00000071282 990 ntBASIC19.95■□□□□ 0.79
Usp47Q8BY87 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp47Q8BY87 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Usp47Q8BY87 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp47Q8BY87 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp47Q8BY87 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp47Q8BY87 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp47Q8BY87 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp47Q8BY87 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp47Q8BY87 Gm12020-201ENSMUST00000119030 2042 ntBASIC19.95■□□□□ 0.78
Usp47Q8BY87 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp47Q8BY87 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Usp47Q8BY87 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC19.95■□□□□ 0.78
Usp47Q8BY87 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp47Q8BY87 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Usp47Q8BY87 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC19.95■□□□□ 0.78
Usp47Q8BY87 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp47Q8BY87 Gm14928-201ENSMUST00000120198 477 ntBASIC19.95■□□□□ 0.78
Usp47Q8BY87 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Usp47Q8BY87 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC19.95■□□□□ 0.78
Usp47Q8BY87 Gm3809-201ENSMUST00000180973 1006 ntBASIC19.95■□□□□ 0.78
Usp47Q8BY87 Gm2445-201ENSMUST00000182798 989 ntBASIC19.95■□□□□ 0.78
Usp47Q8BY87 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC19.95■□□□□ 0.78
Usp47Q8BY87 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC19.95■□□□□ 0.78
Usp47Q8BY87 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp47Q8BY87 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp47Q8BY87 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp47Q8BY87 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp47Q8BY87 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC19.94■□□□□ 0.78
Usp47Q8BY87 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp47Q8BY87 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Usp47Q8BY87 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp47Q8BY87 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Usp47Q8BY87 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Usp47Q8BY87 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp47Q8BY87 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp47Q8BY87 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Usp47Q8BY87 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC19.94■□□□□ 0.78
Usp47Q8BY87 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Usp47Q8BY87 Gm5354-201ENSMUST00000182417 973 ntBASIC19.94■□□□□ 0.78
Usp47Q8BY87 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp47Q8BY87 Gm18905-201ENSMUST00000205454 928 ntBASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms