Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Col16a1Q8BLX7 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Col16a1Q8BLX7 Gm10359-201ENSMUST00000180167 1002 ntBASIC18.33■□□□□ 0.52
Col16a1Q8BLX7 Gm12033-201ENSMUST00000180654 1002 ntBASIC18.33■□□□□ 0.52
Col16a1Q8BLX7 Gm5559-201ENSMUST00000180755 1002 ntBASIC18.33■□□□□ 0.52
Col16a1Q8BLX7 Gm4335-201ENSMUST00000182581 1004 ntBASIC18.33■□□□□ 0.52
Col16a1Q8BLX7 Gm5850-201ENSMUST00000192923 1206 ntBASIC18.33■□□□□ 0.52
Col16a1Q8BLX7 Gm37008-201ENSMUST00000195712 319 ntBASIC18.33■□□□□ 0.52
Col16a1Q8BLX7 Olfr284-202ENSMUST00000206647 966 ntBASIC18.33■□□□□ 0.52
Col16a1Q8BLX7 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col16a1Q8BLX7 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col16a1Q8BLX7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Col16a1Q8BLX7 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col16a1Q8BLX7 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col16a1Q8BLX7 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col16a1Q8BLX7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col16a1Q8BLX7 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col16a1Q8BLX7 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col16a1Q8BLX7 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Col16a1Q8BLX7 Gm38102-201ENSMUST00000192791 1935 ntBASIC18.32■□□□□ 0.52
Col16a1Q8BLX7 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC18.32■□□□□ 0.52
Col16a1Q8BLX7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col16a1Q8BLX7 Gm8706-201ENSMUST00000197372 1491 ntBASIC18.32■□□□□ 0.52
Col16a1Q8BLX7 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC18.32■□□□□ 0.52
Col16a1Q8BLX7 Gm26083-201ENSMUST00000157904 193 ntBASIC18.32■□□□□ 0.52
Col16a1Q8BLX7 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col16a1Q8BLX7 Gm38341-201ENSMUST00000195357 515 ntBASIC18.32■□□□□ 0.52
Col16a1Q8BLX7 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Col16a1Q8BLX7 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col16a1Q8BLX7 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col16a1Q8BLX7 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col16a1Q8BLX7 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col16a1Q8BLX7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col16a1Q8BLX7 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col16a1Q8BLX7 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Col16a1Q8BLX7 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col16a1Q8BLX7 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Col16a1Q8BLX7 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col16a1Q8BLX7 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col16a1Q8BLX7 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col16a1Q8BLX7 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col16a1Q8BLX7 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC18.31■□□□□ 0.52
Col16a1Q8BLX7 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC18.31■□□□□ 0.52
Col16a1Q8BLX7 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col16a1Q8BLX7 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC18.31■□□□□ 0.52
Col16a1Q8BLX7 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col16a1Q8BLX7 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Col16a1Q8BLX7 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col16a1Q8BLX7 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col16a1Q8BLX7 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col16a1Q8BLX7 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col16a1Q8BLX7 AC162938.1-201ENSMUST00000213140 2323 ntBASIC18.31■□□□□ 0.52
Col16a1Q8BLX7 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col16a1Q8BLX7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col16a1Q8BLX7 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col16a1Q8BLX7 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC18.31■□□□□ 0.52
Col16a1Q8BLX7 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col16a1Q8BLX7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Gm15808-201ENSMUST00000119046 604 ntBASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Gm29199-201ENSMUST00000187766 775 ntBASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Gm11960-202ENSMUST00000181063 2858 ntBASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Gm43509-201ENSMUST00000196551 2594 ntBASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Gm37466-201ENSMUST00000195692 652 ntBASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Col16a1Q8BLX7 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Col16a1Q8BLX7 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col16a1Q8BLX7 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC18.29■□□□□ 0.52
Col16a1Q8BLX7 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col16a1Q8BLX7 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col16a1Q8BLX7 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col16a1Q8BLX7 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col16a1Q8BLX7 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms