Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Gm9727-201ENSMUST00000161387 555 ntBASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf38Q8BI21 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Gm43514-201ENSMUST00000198852 424 ntBASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf38Q8BI21 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf38Q8BI21 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.73□□□□□ -0.21
Rnf38Q8BI21 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.73□□□□□ -0.21
Rnf38Q8BI21 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Gm9182-201ENSMUST00000217829 639 ntBASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf38Q8BI21 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf38Q8BI21 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf38Q8BI21 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms