Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Gm18889-201ENSMUST00000174284 929 ntBASIC16.69■□□□□ 0.26
Samm50Q8BGH2 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Samm50Q8BGH2 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.69■□□□□ 0.26
Samm50Q8BGH2 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Samm50Q8BGH2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Samm50Q8BGH2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Samm50Q8BGH2 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Samm50Q8BGH2 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Samm50Q8BGH2 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Samm50Q8BGH2 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Samm50Q8BGH2 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Samm50Q8BGH2 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Samm50Q8BGH2 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC16.69■□□□□ 0.26
Samm50Q8BGH2 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.69■□□□□ 0.26
Samm50Q8BGH2 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Samm50Q8BGH2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Samm50Q8BGH2 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Samm50Q8BGH2 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Samm50Q8BGH2 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Samm50Q8BGH2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Samm50Q8BGH2 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.68■□□□□ 0.26
Samm50Q8BGH2 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Samm50Q8BGH2 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Samm50Q8BGH2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Samm50Q8BGH2 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Samm50Q8BGH2 Gm6973-201ENSMUST00000117080 721 ntBASIC16.68■□□□□ 0.26
Samm50Q8BGH2 Gm11543-201ENSMUST00000120758 370 ntBASIC16.68■□□□□ 0.26
Samm50Q8BGH2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Samm50Q8BGH2 Gm9726-201ENSMUST00000180321 678 ntBASIC16.68■□□□□ 0.26
Samm50Q8BGH2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.68■□□□□ 0.26
Samm50Q8BGH2 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Samm50Q8BGH2 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Samm50Q8BGH2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Samm50Q8BGH2 Ntrk2-209ENSMUST00000225950 2640 ntBASIC16.68■□□□□ 0.26
Samm50Q8BGH2 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Samm50Q8BGH2 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Samm50Q8BGH2 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Samm50Q8BGH2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Samm50Q8BGH2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Samm50Q8BGH2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Samm50Q8BGH2 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Samm50Q8BGH2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Samm50Q8BGH2 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Samm50Q8BGH2 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Samm50Q8BGH2 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Samm50Q8BGH2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Samm50Q8BGH2 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.67■□□□□ 0.26
Samm50Q8BGH2 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.67■□□□□ 0.26
Samm50Q8BGH2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Samm50Q8BGH2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.67■□□□□ 0.26
Samm50Q8BGH2 Mir6990-201ENSMUST00000183724 91 ntBASIC16.67■□□□□ 0.26
Samm50Q8BGH2 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Samm50Q8BGH2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Samm50Q8BGH2 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.67■□□□□ 0.26
Samm50Q8BGH2 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Samm50Q8BGH2 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Samm50Q8BGH2 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Samm50Q8BGH2 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.67■□□□□ 0.26
Samm50Q8BGH2 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Samm50Q8BGH2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Samm50Q8BGH2 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Samm50Q8BGH2 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Samm50Q8BGH2 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.67■□□□□ 0.26
Samm50Q8BGH2 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.67■□□□□ 0.26
Samm50Q8BGH2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Samm50Q8BGH2 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Samm50Q8BGH2 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Samm50Q8BGH2 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Samm50Q8BGH2 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Samm50Q8BGH2 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Gm8396-201ENSMUST00000057361 823 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms