Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp6nlQ80XC3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp6nlQ80XC3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usp6nlQ80XC3 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp6nlQ80XC3 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Usp6nlQ80XC3 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp6nlQ80XC3 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usp6nlQ80XC3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usp6nlQ80XC3 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp6nlQ80XC3 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp6nlQ80XC3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usp6nlQ80XC3 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Usp6nlQ80XC3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Usp6nlQ80XC3 Gm5303-201ENSMUST00000117943 1252 ntBASIC15.66■□□□□ 0.1
Usp6nlQ80XC3 Mir1894-201ENSMUST00000122802 81 ntBASIC15.66■□□□□ 0.1
Usp6nlQ80XC3 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC15.66■□□□□ 0.1
Usp6nlQ80XC3 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usp6nlQ80XC3 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.66■□□□□ 0.1
Usp6nlQ80XC3 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.66■□□□□ 0.1
Usp6nlQ80XC3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Usp6nlQ80XC3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.66■□□□□ 0.1
Usp6nlQ80XC3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Usp6nlQ80XC3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp6nlQ80XC3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp6nlQ80XC3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Usp6nlQ80XC3 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp6nlQ80XC3 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Usp6nlQ80XC3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.66■□□□□ 0.1
Usp6nlQ80XC3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Usp6nlQ80XC3 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Gm12390-201ENSMUST00000117897 397 ntBASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Mir1982-201ENSMUST00000157368 74 ntBASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Gm2495-201ENSMUST00000191160 466 ntBASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Usp6nlQ80XC3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 Gm37714-201ENSMUST00000194742 342 ntBASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 Gm7067-201ENSMUST00000207698 1249 ntBASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 AC131068.2-201ENSMUST00000226175 1453 ntBASIC15.64■□□□□ 0.09
Usp6nlQ80XC3 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms