Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Gm28599-201ENSMUST00000189838 694 ntBASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Gm21867-201ENSMUST00000189917 696 ntBASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Gm29269-201ENSMUST00000190087 696 ntBASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Gm21722-201ENSMUST00000190153 696 ntBASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Gm28423-201ENSMUST00000190701 696 ntBASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Gm21899-201ENSMUST00000190745 696 ntBASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Gm21910-201ENSMUST00000191163 696 ntBASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Gm21849-201ENSMUST00000191571 696 ntBASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Gm28678-201ENSMUST00000191593 696 ntBASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Gm20910-201ENSMUST00000193268 696 ntBASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Gm21871-201ENSMUST00000194621 696 ntBASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.94□□□□□ -0.18
Ccdc116Q80X53 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccdc116Q80X53 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Gm18889-201ENSMUST00000174284 929 ntBASIC13.93□□□□□ -0.18
Ccdc116Q80X53 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Gm27494-201ENSMUST00000184735 189 ntBASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Matn2-206ENSMUST00000228570 2798 ntBASIC13.93□□□□□ -0.18
Ccdc116Q80X53 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.93□□□□□ -0.18
Ccdc116Q80X53 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc116Q80X53 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc116Q80X53 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc116Q80X53 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc116Q80X53 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc116Q80X53 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Ccdc116Q80X53 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc116Q80X53 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc116Q80X53 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc116Q80X53 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc116Q80X53 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc116Q80X53 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc116Q80X53 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc116Q80X53 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.92□□□□□ -0.18
Ccdc116Q80X53 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.92□□□□□ -0.18
Ccdc116Q80X53 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc116Q80X53 Gm12882-201ENSMUST00000121696 517 ntBASIC13.92□□□□□ -0.18
Ccdc116Q80X53 Gm18737-201ENSMUST00000173594 937 ntBASIC13.92□□□□□ -0.18
Ccdc116Q80X53 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.92□□□□□ -0.18
Ccdc116Q80X53 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.92□□□□□ -0.18
Ccdc116Q80X53 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc116Q80X53 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc116Q80X53 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc116Q80X53 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc116Q80X53 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc116Q80X53 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc116Q80X53 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc116Q80X53 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc116Q80X53 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.92□□□□□ -0.18
Ccdc116Q80X53 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.92□□□□□ -0.18
Ccdc116Q80X53 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms