Protein–RNA interactions for Protein: Q6S5L9

Shc4, SHC-transforming protein 4, mousemouse

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc4Q6S5L9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Shc4Q6S5L9 Gm5745-201ENSMUST00000183748 313 ntBASIC13.31□□□□□ -0.28
Shc4Q6S5L9 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.31□□□□□ -0.28
Shc4Q6S5L9 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shc4Q6S5L9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shc4Q6S5L9 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shc4Q6S5L9 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Shc4Q6S5L9 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shc4Q6S5L9 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shc4Q6S5L9 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shc4Q6S5L9 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.31□□□□□ -0.28
Shc4Q6S5L9 Syt7-204ENSMUST00000223586 1344 ntBASIC13.31□□□□□ -0.28
Shc4Q6S5L9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shc4Q6S5L9 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Shc4Q6S5L9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shc4Q6S5L9 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Shc4Q6S5L9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shc4Q6S5L9 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shc4Q6S5L9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shc4Q6S5L9 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Shc4Q6S5L9 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shc4Q6S5L9 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.31□□□□□ -0.28
Shc4Q6S5L9 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Syt7-205ENSMUST00000224135 1557 ntBASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Gm46209-201ENSMUST00000217912 553 ntBASIC13.3□□□□□ -0.28
Shc4Q6S5L9 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shc4Q6S5L9 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shc4Q6S5L9 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shc4Q6S5L9 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shc4Q6S5L9 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shc4Q6S5L9 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.29□□□□□ -0.28
Shc4Q6S5L9 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.29□□□□□ -0.28
Shc4Q6S5L9 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shc4Q6S5L9 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shc4Q6S5L9 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.29□□□□□ -0.28
Shc4Q6S5L9 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.29□□□□□ -0.28
Shc4Q6S5L9 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shc4Q6S5L9 Gm27631-201ENSMUST00000184163 466 ntBASIC13.29□□□□□ -0.28
Shc4Q6S5L9 Gm44855-201ENSMUST00000205725 362 ntBASIC13.29□□□□□ -0.28
Shc4Q6S5L9 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.29□□□□□ -0.28
Shc4Q6S5L9 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.29□□□□□ -0.28
Shc4Q6S5L9 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shc4Q6S5L9 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shc4Q6S5L9 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.29□□□□□ -0.28
Shc4Q6S5L9 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shc4Q6S5L9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Shc4Q6S5L9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shc4Q6S5L9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Shc4Q6S5L9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Shc4Q6S5L9 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Shc4Q6S5L9 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shc4Q6S5L9 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.29□□□□□ -0.28
Shc4Q6S5L9 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shc4Q6S5L9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Shc4Q6S5L9 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Shc4Q6S5L9 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shc4Q6S5L9 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shc4Q6S5L9 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Shc4Q6S5L9 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shc4Q6S5L9 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shc4Q6S5L9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shc4Q6S5L9 Gm7488-201ENSMUST00000117148 684 ntBASIC13.28□□□□□ -0.28
Shc4Q6S5L9 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.28□□□□□ -0.28
Shc4Q6S5L9 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shc4Q6S5L9 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms