Protein–RNA interactions for Protein: Q6PIJ4

Nfrkb, Nuclear factor related to kappa-B-binding protein, mousemouse

Known RBP Predictions only

Length 1,296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfrkbQ6PIJ4 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NfrkbQ6PIJ4 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NfrkbQ6PIJ4 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NfrkbQ6PIJ4 Gm25857-201ENSMUST00000082788 129 ntBASIC16.05■□□□□ 0.16
NfrkbQ6PIJ4 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
NfrkbQ6PIJ4 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NfrkbQ6PIJ4 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NfrkbQ6PIJ4 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NfrkbQ6PIJ4 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NfrkbQ6PIJ4 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Gm12134-201ENSMUST00000122109 520 ntBASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Gm33320-201ENSMUST00000192232 530 ntBASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Gm19220-201ENSMUST00000222682 803 ntBASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.04■□□□□ 0.16
NfrkbQ6PIJ4 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NfrkbQ6PIJ4 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NfrkbQ6PIJ4 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
NfrkbQ6PIJ4 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NfrkbQ6PIJ4 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NfrkbQ6PIJ4 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
NfrkbQ6PIJ4 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NfrkbQ6PIJ4 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NfrkbQ6PIJ4 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NfrkbQ6PIJ4 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
NfrkbQ6PIJ4 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NfrkbQ6PIJ4 Gm10275-202ENSMUST00000168697 495 ntBASIC16.03■□□□□ 0.16
NfrkbQ6PIJ4 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.03■□□□□ 0.16
NfrkbQ6PIJ4 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NfrkbQ6PIJ4 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NfrkbQ6PIJ4 Gm10275-201ENSMUST00000092620 635 ntBASIC16.03■□□□□ 0.16
NfrkbQ6PIJ4 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NfrkbQ6PIJ4 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NfrkbQ6PIJ4 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NfrkbQ6PIJ4 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
NfrkbQ6PIJ4 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
NfrkbQ6PIJ4 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NfrkbQ6PIJ4 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NfrkbQ6PIJ4 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NfrkbQ6PIJ4 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NfrkbQ6PIJ4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.02■□□□□ 0.16
NfrkbQ6PIJ4 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NfrkbQ6PIJ4 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NfrkbQ6PIJ4 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.02■□□□□ 0.16
NfrkbQ6PIJ4 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.02■□□□□ 0.16
NfrkbQ6PIJ4 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NfrkbQ6PIJ4 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
NfrkbQ6PIJ4 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NfrkbQ6PIJ4 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NfrkbQ6PIJ4 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NfrkbQ6PIJ4 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NfrkbQ6PIJ4 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NfrkbQ6PIJ4 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NfrkbQ6PIJ4 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NfrkbQ6PIJ4 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NfrkbQ6PIJ4 Gm15393-201ENSMUST00000120499 219 ntBASIC16.02■□□□□ 0.16
NfrkbQ6PIJ4 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
NfrkbQ6PIJ4 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.02■□□□□ 0.16
NfrkbQ6PIJ4 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.02■□□□□ 0.16
NfrkbQ6PIJ4 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NfrkbQ6PIJ4 Mir6392-201ENSMUST00000184924 108 ntBASIC16.02■□□□□ 0.16
NfrkbQ6PIJ4 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.02■□□□□ 0.16
NfrkbQ6PIJ4 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.16
NfrkbQ6PIJ4 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.02■□□□□ 0.16
NfrkbQ6PIJ4 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NfrkbQ6PIJ4 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NfrkbQ6PIJ4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NfrkbQ6PIJ4 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NfrkbQ6PIJ4 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NfrkbQ6PIJ4 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NfrkbQ6PIJ4 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms