Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Gm7029-201ENSMUST00000173226 450 ntBASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Mir8109-201ENSMUST00000184375 117 ntBASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Gm19184-201ENSMUST00000196798 928 ntBASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 AC155237.1-201ENSMUST00000226196 1279 ntBASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chd4Q6PDQ2 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Chd4Q6PDQ2 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chd4Q6PDQ2 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chd4Q6PDQ2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Chd4Q6PDQ2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.23■□□□□ 0.51
Chd4Q6PDQ2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chd4Q6PDQ2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Chd4Q6PDQ2 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chd4Q6PDQ2 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chd4Q6PDQ2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chd4Q6PDQ2 Gm18630-201ENSMUST00000222109 1397 ntBASIC18.23■□□□□ 0.51
Chd4Q6PDQ2 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chd4Q6PDQ2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chd4Q6PDQ2 Gm38671-201ENSMUST00000200573 130 ntBASIC18.23■□□□□ 0.51
Chd4Q6PDQ2 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC18.23■□□□□ 0.51
Chd4Q6PDQ2 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Chd4Q6PDQ2 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chd4Q6PDQ2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chd4Q6PDQ2 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chd4Q6PDQ2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chd4Q6PDQ2 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Chd4Q6PDQ2 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chd4Q6PDQ2 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chd4Q6PDQ2 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chd4Q6PDQ2 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chd4Q6PDQ2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chd4Q6PDQ2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Chd4Q6PDQ2 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chd4Q6PDQ2 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chd4Q6PDQ2 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Chd4Q6PDQ2 Mir698-201ENSMUST00000102164 109 ntBASIC18.22■□□□□ 0.51
Chd4Q6PDQ2 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chd4Q6PDQ2 Gm14350-201ENSMUST00000116642 640 ntBASIC18.22■□□□□ 0.51
Chd4Q6PDQ2 Gm14723-201ENSMUST00000118686 215 ntBASIC18.22■□□□□ 0.51
Chd4Q6PDQ2 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Chd4Q6PDQ2 Gm40466-201ENSMUST00000212174 422 ntBASIC18.22■□□□□ 0.51
Chd4Q6PDQ2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Chd4Q6PDQ2 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chd4Q6PDQ2 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Chd4Q6PDQ2 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chd4Q6PDQ2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chd4Q6PDQ2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chd4Q6PDQ2 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Chd4Q6PDQ2 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chd4Q6PDQ2 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Chd4Q6PDQ2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Chd4Q6PDQ2 Mir686-201ENSMUST00000102174 109 ntBASIC18.21■□□□□ 0.51
Chd4Q6PDQ2 Gm13886-201ENSMUST00000117876 1183 ntBASIC18.21■□□□□ 0.51
Chd4Q6PDQ2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC18.21■□□□□ 0.51
Chd4Q6PDQ2 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Chd4Q6PDQ2 Gm8565-201ENSMUST00000183259 1014 ntBASIC18.21■□□□□ 0.51
Chd4Q6PDQ2 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Chd4Q6PDQ2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC18.21■□□□□ 0.51
Chd4Q6PDQ2 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chd4Q6PDQ2 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC18.21■□□□□ 0.51
Chd4Q6PDQ2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
Chd4Q6PDQ2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chd4Q6PDQ2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chd4Q6PDQ2 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Chd4Q6PDQ2 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC18.21■□□□□ 0.51
Chd4Q6PDQ2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC18.21■□□□□ 0.51
Chd4Q6PDQ2 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chd4Q6PDQ2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Chd4Q6PDQ2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chd4Q6PDQ2 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Chd4Q6PDQ2 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC18.21■□□□□ 0.51
Chd4Q6PDQ2 Gm43133-201ENSMUST00000197472 463 ntBASIC18.21■□□□□ 0.51
Chd4Q6PDQ2 Gm9299-201ENSMUST00000206392 1140 ntBASIC18.21■□□□□ 0.51
Chd4Q6PDQ2 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Chd4Q6PDQ2 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC18.21■□□□□ 0.51
Chd4Q6PDQ2 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC18.21■□□□□ 0.51
Chd4Q6PDQ2 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC18.21■□□□□ 0.5
Chd4Q6PDQ2 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms