Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sp140Q6NSQ5 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Sp140Q6NSQ5 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sp140Q6NSQ5 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sp140Q6NSQ5 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sp140Q6NSQ5 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.44□□□□□ -0.1
Sp140Q6NSQ5 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Sp140Q6NSQ5 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Sp140Q6NSQ5 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.44□□□□□ -0.1
Sp140Q6NSQ5 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sp140Q6NSQ5 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Gm29310-201ENSMUST00000185468 696 ntBASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Gm21825-201ENSMUST00000185728 696 ntBASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Gm29109-201ENSMUST00000185895 696 ntBASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Gm21896-201ENSMUST00000186520 696 ntBASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Gm21873-201ENSMUST00000186728 696 ntBASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Gm21794-201ENSMUST00000187056 696 ntBASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Gm21880-201ENSMUST00000187275 696 ntBASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Gm21826-201ENSMUST00000187451 696 ntBASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Gm21198-201ENSMUST00000188393 696 ntBASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Gm21749-201ENSMUST00000189343 696 ntBASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Gm21901-201ENSMUST00000189568 696 ntBASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Gm29424-201ENSMUST00000189716 696 ntBASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Gm28599-201ENSMUST00000189838 694 ntBASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Gm21867-201ENSMUST00000189917 696 ntBASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Gm29269-201ENSMUST00000190087 696 ntBASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Gm21722-201ENSMUST00000190153 696 ntBASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Gm28423-201ENSMUST00000190701 696 ntBASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Gm21899-201ENSMUST00000190745 696 ntBASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Gm21910-201ENSMUST00000191163 696 ntBASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Gm21849-201ENSMUST00000191571 696 ntBASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Gm28678-201ENSMUST00000191593 696 ntBASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Gm20910-201ENSMUST00000193268 696 ntBASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Gm21871-201ENSMUST00000194621 696 ntBASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sp140Q6NSQ5 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Gm13015-201ENSMUST00000118674 204 ntBASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Mir1895-201ENSMUST00000122615 79 ntBASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sp140Q6NSQ5 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms