Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AtmQ62388 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AtmQ62388 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AtmQ62388 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
AtmQ62388 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AtmQ62388 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
AtmQ62388 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.18□□□□□ -0.3
AtmQ62388 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AtmQ62388 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AtmQ62388 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
AtmQ62388 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
AtmQ62388 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AtmQ62388 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AtmQ62388 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
AtmQ62388 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AtmQ62388 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AtmQ62388 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AtmQ62388 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.17□□□□□ -0.3
AtmQ62388 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AtmQ62388 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AtmQ62388 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AtmQ62388 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AtmQ62388 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
AtmQ62388 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.17□□□□□ -0.3
AtmQ62388 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.17□□□□□ -0.3
AtmQ62388 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AtmQ62388 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.17□□□□□ -0.3
AtmQ62388 Gm26927-201ENSMUST00000182385 965 ntBASIC13.17□□□□□ -0.3
AtmQ62388 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.17□□□□□ -0.3
AtmQ62388 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.17□□□□□ -0.3
AtmQ62388 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
AtmQ62388 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.17□□□□□ -0.3
AtmQ62388 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
AtmQ62388 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AtmQ62388 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AtmQ62388 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
AtmQ62388 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AtmQ62388 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AtmQ62388 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
AtmQ62388 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AtmQ62388 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
AtmQ62388 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AtmQ62388 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
AtmQ62388 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
AtmQ62388 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
AtmQ62388 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.17□□□□□ -0.3
AtmQ62388 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
AtmQ62388 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.16□□□□□ -0.3
AtmQ62388 Gm8927-201ENSMUST00000181978 981 ntBASIC13.16□□□□□ -0.3
AtmQ62388 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
AtmQ62388 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
AtmQ62388 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AtmQ62388 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AtmQ62388 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.16□□□□□ -0.3
AtmQ62388 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.16□□□□□ -0.3
AtmQ62388 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AtmQ62388 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
AtmQ62388 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AtmQ62388 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.16□□□□□ -0.3
AtmQ62388 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AtmQ62388 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AtmQ62388 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
AtmQ62388 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.16□□□□□ -0.3
AtmQ62388 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AtmQ62388 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
AtmQ62388 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
AtmQ62388 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AtmQ62388 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AtmQ62388 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
AtmQ62388 Gm8099-201ENSMUST00000200510 742 ntBASIC13.16□□□□□ -0.3
AtmQ62388 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.16□□□□□ -0.3
AtmQ62388 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AtmQ62388 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AtmQ62388 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AtmQ62388 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AtmQ62388 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AtmQ62388 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AtmQ62388 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AtmQ62388 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
AtmQ62388 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AtmQ62388 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AtmQ62388 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
AtmQ62388 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AtmQ62388 Gm12882-201ENSMUST00000121696 517 ntBASIC13.16□□□□□ -0.3
AtmQ62388 Gm25261-201ENSMUST00000157416 134 ntBASIC13.16□□□□□ -0.3
AtmQ62388 Gm38223-201ENSMUST00000194484 695 ntBASIC13.16□□□□□ -0.3
AtmQ62388 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
AtmQ62388 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AtmQ62388 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
AtmQ62388 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
AtmQ62388 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
AtmQ62388 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
AtmQ62388 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
AtmQ62388 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.15□□□□□ -0.3
AtmQ62388 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
AtmQ62388 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
AtmQ62388 Mir6927-201ENSMUST00000184494 71 ntBASIC13.15□□□□□ -0.3
AtmQ62388 Gm8959-201ENSMUST00000213150 571 ntBASIC13.15□□□□□ -0.3
AtmQ62388 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
AtmQ62388 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms