Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a1Q61245 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Col11a1Q61245 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a1Q61245 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a1Q61245 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC15.6■□□□□ 0.09
Col11a1Q61245 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.6■□□□□ 0.09
Col11a1Q61245 Gm13297-201ENSMUST00000120205 934 ntBASIC15.6■□□□□ 0.09
Col11a1Q61245 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC15.6■□□□□ 0.09
Col11a1Q61245 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a1Q61245 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC15.6■□□□□ 0.09
Col11a1Q61245 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a1Q61245 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a1Q61245 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a1Q61245 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.6■□□□□ 0.09
Col11a1Q61245 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a1Q61245 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a1Q61245 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a1Q61245 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a1Q61245 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a1Q61245 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a1Q61245 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a1Q61245 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a1Q61245 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a1Q61245 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a1Q61245 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC15.59■□□□□ 0.09
Col11a1Q61245 Gm3890-201ENSMUST00000182416 207 ntBASIC15.59■□□□□ 0.09
Col11a1Q61245 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a1Q61245 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.59■□□□□ 0.09
Col11a1Q61245 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a1Q61245 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.59■□□□□ 0.09
Col11a1Q61245 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a1Q61245 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Col11a1Q61245 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC15.59■□□□□ 0.09
Col11a1Q61245 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a1Q61245 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a1Q61245 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a1Q61245 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.59■□□□□ 0.09
Col11a1Q61245 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a1Q61245 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a1Q61245 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.59■□□□□ 0.09
Col11a1Q61245 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Col11a1Q61245 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Col11a1Q61245 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a1Q61245 Gm4986-201ENSMUST00000119731 549 ntBASIC15.59■□□□□ 0.09
Col11a1Q61245 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC15.59■□□□□ 0.09
Col11a1Q61245 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.59■□□□□ 0.09
Col11a1Q61245 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a1Q61245 AC122371.3-201ENSMUST00000223402 1061 ntBASIC15.59■□□□□ 0.09
Col11a1Q61245 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a1Q61245 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a1Q61245 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a1Q61245 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.58■□□□□ 0.09
Col11a1Q61245 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Col11a1Q61245 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Col11a1Q61245 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Col11a1Q61245 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.58■□□□□ 0.09
Col11a1Q61245 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col11a1Q61245 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col11a1Q61245 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC15.58■□□□□ 0.08
Col11a1Q61245 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col11a1Q61245 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC15.58■□□□□ 0.08
Col11a1Q61245 Gm20482-202ENSMUST00000174729 825 ntBASIC15.58■□□□□ 0.08
Col11a1Q61245 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Col11a1Q61245 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC15.58■□□□□ 0.08
Col11a1Q61245 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Col11a1Q61245 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Col11a1Q61245 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Col11a1Q61245 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Col11a1Q61245 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC15.58■□□□□ 0.08
Col11a1Q61245 Gm10608-202ENSMUST00000213924 676 ntBASIC15.58■□□□□ 0.08
Col11a1Q61245 Gm17330-201ENSMUST00000221047 165 ntBASIC15.58■□□□□ 0.08
Col11a1Q61245 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Col11a1Q61245 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Col11a1Q61245 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col11a1Q61245 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Col11a1Q61245 Gm16372-201ENSMUST00000073088 450 ntBASIC15.58■□□□□ 0.08
Col11a1Q61245 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.58■□□□□ 0.08
Col11a1Q61245 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col11a1Q61245 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Col11a1Q61245 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Col11a1Q61245 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col11a1Q61245 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col11a1Q61245 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col11a1Q61245 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col11a1Q61245 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col11a1Q61245 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC15.57■□□□□ 0.08
Col11a1Q61245 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC15.57■□□□□ 0.08
Col11a1Q61245 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col11a1Q61245 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.57■□□□□ 0.08
Col11a1Q61245 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Col11a1Q61245 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col11a1Q61245 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col11a1Q61245 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC15.57■□□□□ 0.08
Col11a1Q61245 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC15.57■□□□□ 0.08
Col11a1Q61245 Gm7809-201ENSMUST00000153199 742 ntBASIC15.57■□□□□ 0.08
Col11a1Q61245 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC15.57■□□□□ 0.08
Col11a1Q61245 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Col11a1Q61245 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.57■□□□□ 0.08
Col11a1Q61245 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.57■□□□□ 0.08
Col11a1Q61245 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms