Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.56□□□□□ -0.24
Nr1h4Q60641 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Nr1h4Q60641 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Nr1h4Q60641 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.56□□□□□ -0.24
Nr1h4Q60641 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Nr1h4Q60641 Gm9103-201ENSMUST00000119371 405 ntBASIC13.56□□□□□ -0.24
Nr1h4Q60641 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.56□□□□□ -0.24
Nr1h4Q60641 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Nr1h4Q60641 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 Gm27300-201ENSMUST00000184085 97 ntBASIC13.56□□□□□ -0.24
Nr1h4Q60641 Gm27335-201ENSMUST00000184758 97 ntBASIC13.56□□□□□ -0.24
Nr1h4Q60641 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.56□□□□□ -0.24
Nr1h4Q60641 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.56□□□□□ -0.24
Nr1h4Q60641 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.56□□□□□ -0.24
Nr1h4Q60641 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.56□□□□□ -0.24
Nr1h4Q60641 Gm10154-201ENSMUST00000084445 354 ntBASIC13.56□□□□□ -0.24
Nr1h4Q60641 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nr1h4Q60641 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nr1h4Q60641 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nr1h4Q60641 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nr1h4Q60641 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nr1h4Q60641 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nr1h4Q60641 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Nr1h4Q60641 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nr1h4Q60641 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nr1h4Q60641 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Nr1h4Q60641 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nr1h4Q60641 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nr1h4Q60641 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.55□□□□□ -0.24
Nr1h4Q60641 Gm45098-201ENSMUST00000207179 657 ntBASIC13.55□□□□□ -0.24
Nr1h4Q60641 Gm45747-201ENSMUST00000212203 999 ntBASIC13.55□□□□□ -0.24
Nr1h4Q60641 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.55□□□□□ -0.24
Nr1h4Q60641 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.55□□□□□ -0.24
Nr1h4Q60641 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nr1h4Q60641 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.55□□□□□ -0.24
Nr1h4Q60641 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nr1h4Q60641 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.55□□□□□ -0.24
Nr1h4Q60641 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Nr1h4Q60641 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nr1h4Q60641 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nr1h4Q60641 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nr1h4Q60641 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.55□□□□□ -0.24
Nr1h4Q60641 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nr1h4Q60641 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nr1h4Q60641 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nr1h4Q60641 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.55□□□□□ -0.24
Nr1h4Q60641 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.55□□□□□ -0.24
Nr1h4Q60641 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nr1h4Q60641 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nr1h4Q60641 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nr1h4Q60641 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Nr1h4Q60641 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nr1h4Q60641 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nr1h4Q60641 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nr1h4Q60641 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nr1h4Q60641 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nr1h4Q60641 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nr1h4Q60641 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nr1h4Q60641 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nr1h4Q60641 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nr1h4Q60641 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nr1h4Q60641 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.54□□□□□ -0.24
Nr1h4Q60641 Gm8584-201ENSMUST00000171982 758 ntBASIC13.54□□□□□ -0.24
Nr1h4Q60641 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nr1h4Q60641 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.54□□□□□ -0.24
Nr1h4Q60641 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.54□□□□□ -0.24
Nr1h4Q60641 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.54□□□□□ -0.24
Nr1h4Q60641 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nr1h4Q60641 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nr1h4Q60641 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nr1h4Q60641 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nr1h4Q60641 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nr1h4Q60641 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nr1h4Q60641 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nr1h4Q60641 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms