Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC17.06■□□□□ 0.32
Vps54Q5SPW0 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Vps54Q5SPW0 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Gm27838-201ENSMUST00000184829 128 ntBASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Ighv8-14-201ENSMUST00000196781 358 ntBASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Vps54Q5SPW0 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Vps54Q5SPW0 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vps54Q5SPW0 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vps54Q5SPW0 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps54Q5SPW0 Syt7-204ENSMUST00000223586 1344 ntBASIC17.04■□□□□ 0.32
Vps54Q5SPW0 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vps54Q5SPW0 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vps54Q5SPW0 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps54Q5SPW0 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps54Q5SPW0 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vps54Q5SPW0 Gm15321-201ENSMUST00000121290 288 ntBASIC17.04■□□□□ 0.32
Vps54Q5SPW0 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Vps54Q5SPW0 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vps54Q5SPW0 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Vps54Q5SPW0 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC17.04■□□□□ 0.32
Vps54Q5SPW0 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vps54Q5SPW0 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Vps54Q5SPW0 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps54Q5SPW0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps54Q5SPW0 Gm2423-201ENSMUST00000074863 733 ntBASIC17.04■□□□□ 0.32
Vps54Q5SPW0 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps54Q5SPW0 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps54Q5SPW0 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vps54Q5SPW0 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.04■□□□□ 0.32
Vps54Q5SPW0 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps54Q5SPW0 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Vps54Q5SPW0 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps54Q5SPW0 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vps54Q5SPW0 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vps54Q5SPW0 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps54Q5SPW0 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Vps54Q5SPW0 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps54Q5SPW0 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Vps54Q5SPW0 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps54Q5SPW0 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps54Q5SPW0 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps54Q5SPW0 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vps54Q5SPW0 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps54Q5SPW0 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps54Q5SPW0 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps54Q5SPW0 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC17.03■□□□□ 0.32
Vps54Q5SPW0 Gm44608-201ENSMUST00000206827 855 ntBASIC17.03■□□□□ 0.32
Vps54Q5SPW0 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.03■□□□□ 0.32
Vps54Q5SPW0 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps54Q5SPW0 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps54Q5SPW0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps54Q5SPW0 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps54Q5SPW0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Vps54Q5SPW0 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC17.03■□□□□ 0.32
Vps54Q5SPW0 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps54Q5SPW0 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps54Q5SPW0 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vps54Q5SPW0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vps54Q5SPW0 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps54Q5SPW0 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps54Q5SPW0 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Vps54Q5SPW0 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps54Q5SPW0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps54Q5SPW0 Gm38102-201ENSMUST00000192791 1935 ntBASIC17.02■□□□□ 0.32
Vps54Q5SPW0 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps54Q5SPW0 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Vps54Q5SPW0 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vps54Q5SPW0 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms