Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav5d-4Q5R1F6 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Acot6-202ENSMUST00000222921 3622 ntBASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Gm2810-201ENSMUST00000118681 990 ntBASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Gm11594-201ENSMUST00000122313 162 ntBASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Gm10275-202ENSMUST00000168697 495 ntBASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Gm18737-201ENSMUST00000173594 937 ntBASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Gm10275-201ENSMUST00000092620 635 ntBASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5d-4Q5R1F6 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5d-4Q5R1F6 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5d-4Q5R1F6 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5d-4Q5R1F6 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5d-4Q5R1F6 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5d-4Q5R1F6 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5d-4Q5R1F6 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav5d-4Q5R1F6 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5d-4Q5R1F6 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.23□□□□□ -0.45
Trav5d-4Q5R1F6 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.23□□□□□ -0.45
Trav5d-4Q5R1F6 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.23□□□□□ -0.45
Trav5d-4Q5R1F6 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav5d-4Q5R1F6 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.23□□□□□ -0.45
Trav5d-4Q5R1F6 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav5d-4Q5R1F6 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.23□□□□□ -0.45
Trav5d-4Q5R1F6 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5d-4Q5R1F6 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5d-4Q5R1F6 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5d-4Q5R1F6 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5d-4Q5R1F6 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5d-4Q5R1F6 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav5d-4Q5R1F6 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav5d-4Q5R1F6 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5d-4Q5R1F6 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5d-4Q5R1F6 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav5d-4Q5R1F6 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5d-4Q5R1F6 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5d-4Q5R1F6 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Gm27494-201ENSMUST00000184735 189 ntBASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Gm38225-201ENSMUST00000194001 393 ntBASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms