Protein–RNA interactions for Protein: Q5PSV9

Mdc1, Mediator of DNA damage checkpoint protein 1, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mdc1Q5PSV9 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC18.33■□□□□ 0.52
Mdc1Q5PSV9 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mdc1Q5PSV9 Ankra2-208ENSMUST00000226100 1476 ntBASIC18.33■□□□□ 0.52
Mdc1Q5PSV9 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mdc1Q5PSV9 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mdc1Q5PSV9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mdc1Q5PSV9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Mdc1Q5PSV9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Mdc1Q5PSV9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.33■□□□□ 0.52
Mdc1Q5PSV9 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Mdc1Q5PSV9 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Mdc1Q5PSV9 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mdc1Q5PSV9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mdc1Q5PSV9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mdc1Q5PSV9 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mdc1Q5PSV9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mdc1Q5PSV9 Gm7553-201ENSMUST00000185805 1426 ntBASIC18.33■□□□□ 0.52
Mdc1Q5PSV9 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Gm12203-201ENSMUST00000118235 598 ntBASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Gm12537-201ENSMUST00000119266 1002 ntBASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Gm12070-201ENSMUST00000119551 1002 ntBASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Gm12671-201ENSMUST00000119978 1002 ntBASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Gm13292-201ENSMUST00000120014 1000 ntBASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Gm12209-201ENSMUST00000120089 596 ntBASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Gm12403-201ENSMUST00000121384 959 ntBASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Gm8810-201ENSMUST00000172895 754 ntBASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Gm4271-201ENSMUST00000174444 973 ntBASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Gm10359-201ENSMUST00000180167 1002 ntBASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Gm12033-201ENSMUST00000180654 1002 ntBASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Gm5559-201ENSMUST00000180755 1002 ntBASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Gm4335-201ENSMUST00000182581 1004 ntBASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Gm37736-201ENSMUST00000193564 2802 ntBASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Mir8109-201ENSMUST00000184375 117 ntBASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 AC126253.1-201ENSMUST00000227974 824 ntBASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mdc1Q5PSV9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mdc1Q5PSV9 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mdc1Q5PSV9 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mdc1Q5PSV9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mdc1Q5PSV9 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC18.31■□□□□ 0.52
Mdc1Q5PSV9 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC18.31■□□□□ 0.52
Mdc1Q5PSV9 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mdc1Q5PSV9 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mdc1Q5PSV9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mdc1Q5PSV9 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC18.31■□□□□ 0.52
Mdc1Q5PSV9 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mdc1Q5PSV9 Gm5940-201ENSMUST00000117582 1068 ntBASIC18.31■□□□□ 0.52
Mdc1Q5PSV9 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mdc1Q5PSV9 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC18.31■□□□□ 0.52
Mdc1Q5PSV9 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Mdc1Q5PSV9 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC18.31■□□□□ 0.52
Mdc1Q5PSV9 Gm7399-201ENSMUST00000032395 858 ntBASIC18.31■□□□□ 0.52
Mdc1Q5PSV9 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mdc1Q5PSV9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mdc1Q5PSV9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mdc1Q5PSV9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mdc1Q5PSV9 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC18.31■□□□□ 0.52
Mdc1Q5PSV9 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mdc1Q5PSV9 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.3■□□□□ 0.52
Mdc1Q5PSV9 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mdc1Q5PSV9 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mdc1Q5PSV9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mdc1Q5PSV9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Mdc1Q5PSV9 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mdc1Q5PSV9 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mdc1Q5PSV9 Gm10156-201ENSMUST00000122364 462 ntBASIC18.3■□□□□ 0.52
Mdc1Q5PSV9 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mdc1Q5PSV9 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC18.3■□□□□ 0.52
Mdc1Q5PSV9 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mdc1Q5PSV9 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mdc1Q5PSV9 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mdc1Q5PSV9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Mdc1Q5PSV9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mdc1Q5PSV9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mdc1Q5PSV9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Mdc1Q5PSV9 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mdc1Q5PSV9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mdc1Q5PSV9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mdc1Q5PSV9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mdc1Q5PSV9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mdc1Q5PSV9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mdc1Q5PSV9 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms