Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.08□□□□□ -0.16
Scn2bQ56A07 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn2bQ56A07 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scn2bQ56A07 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn2bQ56A07 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn2bQ56A07 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.07□□□□□ -0.16
Scn2bQ56A07 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.07□□□□□ -0.16
Scn2bQ56A07 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
Scn2bQ56A07 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn2bQ56A07 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn2bQ56A07 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Scn2bQ56A07 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn2bQ56A07 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn2bQ56A07 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn2bQ56A07 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
Scn2bQ56A07 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn2bQ56A07 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Scn2bQ56A07 Gm27702-201ENSMUST00000184512 56 ntBASIC14.07□□□□□ -0.16
Scn2bQ56A07 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.07□□□□□ -0.16
Scn2bQ56A07 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn2bQ56A07 Gm45098-201ENSMUST00000207179 657 ntBASIC14.07□□□□□ -0.16
Scn2bQ56A07 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.07□□□□□ -0.16
Scn2bQ56A07 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn2bQ56A07 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn2bQ56A07 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn2bQ56A07 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn2bQ56A07 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn2bQ56A07 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn2bQ56A07 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn2bQ56A07 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Scn2bQ56A07 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Scn2bQ56A07 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn2bQ56A07 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Scn2bQ56A07 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn2bQ56A07 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn2bQ56A07 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn2bQ56A07 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Scn2bQ56A07 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn2bQ56A07 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Scn2bQ56A07 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn2bQ56A07 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn2bQ56A07 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn2bQ56A07 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.06□□□□□ -0.16
Scn2bQ56A07 Gm15427-201ENSMUST00000117288 531 ntBASIC14.06□□□□□ -0.16
Scn2bQ56A07 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.06□□□□□ -0.16
Scn2bQ56A07 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.06□□□□□ -0.16
Scn2bQ56A07 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Scn2bQ56A07 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn2bQ56A07 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.06□□□□□ -0.16
Scn2bQ56A07 Gm9182-201ENSMUST00000217829 639 ntBASIC14.06□□□□□ -0.16
Scn2bQ56A07 Gm5867-201ENSMUST00000063197 592 ntBASIC14.06□□□□□ -0.16
Scn2bQ56A07 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.06□□□□□ -0.16
Scn2bQ56A07 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn2bQ56A07 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn2bQ56A07 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn2bQ56A07 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn2bQ56A07 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn2bQ56A07 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn2bQ56A07 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Scn2bQ56A07 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn2bQ56A07 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Scn2bQ56A07 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Scn2bQ56A07 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.06□□□□□ -0.16
Scn2bQ56A07 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn2bQ56A07 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn2bQ56A07 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn2bQ56A07 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.05□□□□□ -0.16
Scn2bQ56A07 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scn2bQ56A07 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn2bQ56A07 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn2bQ56A07 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn2bQ56A07 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn2bQ56A07 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Scn2bQ56A07 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Scn2bQ56A07 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.05□□□□□ -0.16
Scn2bQ56A07 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.05□□□□□ -0.16
Scn2bQ56A07 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.05□□□□□ -0.16
Scn2bQ56A07 Gm25911-201ENSMUST00000157621 56 ntBASIC14.05□□□□□ -0.16
Scn2bQ56A07 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn2bQ56A07 Gm10275-202ENSMUST00000168697 495 ntBASIC14.05□□□□□ -0.16
Scn2bQ56A07 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.05□□□□□ -0.16
Scn2bQ56A07 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms