Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx49Q4FZF3 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx49Q4FZF3 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.52■□□□□ 0.24
Ddx49Q4FZF3 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ddx49Q4FZF3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.52■□□□□ 0.24
Ddx49Q4FZF3 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC16.52■□□□□ 0.24
Ddx49Q4FZF3 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC16.52■□□□□ 0.24
Ddx49Q4FZF3 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx49Q4FZF3 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx49Q4FZF3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx49Q4FZF3 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Ddx49Q4FZF3 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ddx49Q4FZF3 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx49Q4FZF3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx49Q4FZF3 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx49Q4FZF3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx49Q4FZF3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx49Q4FZF3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx49Q4FZF3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx49Q4FZF3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx49Q4FZF3 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx49Q4FZF3 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ddx49Q4FZF3 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx49Q4FZF3 Mir1894-201ENSMUST00000122802 81 ntBASIC16.51■□□□□ 0.23
Ddx49Q4FZF3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx49Q4FZF3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx49Q4FZF3 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ddx49Q4FZF3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ddx49Q4FZF3 Gm17795-201ENSMUST00000214505 757 ntBASIC16.51■□□□□ 0.23
Ddx49Q4FZF3 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx49Q4FZF3 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.51■□□□□ 0.23
Ddx49Q4FZF3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx49Q4FZF3 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx49Q4FZF3 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx49Q4FZF3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx49Q4FZF3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx49Q4FZF3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx49Q4FZF3 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx49Q4FZF3 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx49Q4FZF3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 Gm10275-202ENSMUST00000168697 495 ntBASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 Gm21470-201ENSMUST00000187680 696 ntBASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 Gm10275-201ENSMUST00000092620 635 ntBASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx49Q4FZF3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Gm13392-201ENSMUST00000117708 150 ntBASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Gm13226-201ENSMUST00000117838 404 ntBASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Gm17794-201ENSMUST00000220252 955 ntBASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ddx49Q4FZF3 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms