Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc27Q3V036 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc27Q3V036 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc27Q3V036 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc27Q3V036 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc27Q3V036 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc27Q3V036 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc27Q3V036 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc27Q3V036 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc27Q3V036 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC18.15■□□□□ 0.5
Ccdc27Q3V036 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc27Q3V036 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ccdc27Q3V036 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Ccdc27Q3V036 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc27Q3V036 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc27Q3V036 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc27Q3V036 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ccdc27Q3V036 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ccdc27Q3V036 Gm14140-201ENSMUST00000119999 995 ntBASIC18.15■□□□□ 0.5
Ccdc27Q3V036 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ccdc27Q3V036 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.15■□□□□ 0.5
Ccdc27Q3V036 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.15■□□□□ 0.5
Ccdc27Q3V036 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc27Q3V036 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc27Q3V036 Gm11405-201ENSMUST00000118689 1556 ntBASIC18.15■□□□□ 0.5
Ccdc27Q3V036 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.15■□□□□ 0.5
Ccdc27Q3V036 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc27Q3V036 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc27Q3V036 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc27Q3V036 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc27Q3V036 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc27Q3V036 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc27Q3V036 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc27Q3V036 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc27Q3V036 Gm20632-201ENSMUST00000176760 2427 ntBASIC18.14■□□□□ 0.5
Ccdc27Q3V036 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ccdc27Q3V036 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc27Q3V036 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC18.14■□□□□ 0.49
Ccdc27Q3V036 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc27Q3V036 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc27Q3V036 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Ccdc27Q3V036 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc27Q3V036 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc27Q3V036 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc27Q3V036 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Ccdc27Q3V036 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc27Q3V036 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC18.14■□□□□ 0.49
Ccdc27Q3V036 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.14■□□□□ 0.49
Ccdc27Q3V036 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.14■□□□□ 0.49
Ccdc27Q3V036 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.14■□□□□ 0.49
Ccdc27Q3V036 Psmb5-202ENSMUST00000227257 622 ntBASIC18.14■□□□□ 0.49
Ccdc27Q3V036 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc27Q3V036 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC18.14■□□□□ 0.49
Ccdc27Q3V036 Gm10154-201ENSMUST00000084445 354 ntBASIC18.14■□□□□ 0.49
Ccdc27Q3V036 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc27Q3V036 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc27Q3V036 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC18.14■□□□□ 0.49
Ccdc27Q3V036 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc27Q3V036 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc27Q3V036 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC18.14■□□□□ 0.49
Ccdc27Q3V036 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc27Q3V036 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Ccdc27Q3V036 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC18.14■□□□□ 0.49
Ccdc27Q3V036 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc27Q3V036 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc27Q3V036 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Gm16198-201ENSMUST00000118766 670 ntBASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Gm13464-201ENSMUST00000119418 935 ntBASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Gm16026-204ENSMUST00000162652 683 ntBASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Gm9726-201ENSMUST00000180321 678 ntBASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms