Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm10275-202ENSMUST00000168697 495 ntBASIC12.96□□□□□ -0.33
Spg11Q3UHA3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.96□□□□□ -0.33
Spg11Q3UHA3 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Spg11Q3UHA3 Gm10275-201ENSMUST00000092620 635 ntBASIC12.96□□□□□ -0.33
Spg11Q3UHA3 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Spg11Q3UHA3 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Spg11Q3UHA3 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Spg11Q3UHA3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Spg11Q3UHA3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.96□□□□□ -0.34
Spg11Q3UHA3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Spg11Q3UHA3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Spg11Q3UHA3 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
Spg11Q3UHA3 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Spg11Q3UHA3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Spg11Q3UHA3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Spg11Q3UHA3 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Spg11Q3UHA3 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Spg11Q3UHA3 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.96□□□□□ -0.34
Spg11Q3UHA3 Gm14726-201ENSMUST00000120623 896 ntBASIC12.96□□□□□ -0.34
Spg11Q3UHA3 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Spg11Q3UHA3 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Spg11Q3UHA3 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.96□□□□□ -0.34
Spg11Q3UHA3 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Spg11Q3UHA3 Gm38223-201ENSMUST00000194484 695 ntBASIC12.96□□□□□ -0.34
Spg11Q3UHA3 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.34
Spg11Q3UHA3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Gm13570-201ENSMUST00000140763 309 ntBASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Spg11Q3UHA3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Gm11667-201ENSMUST00000119828 486 ntBASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Gm24548-201ENSMUST00000158650 108 ntBASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 App-207ENSMUST00000227737 2827 ntBASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Gm14208-201ENSMUST00000119645 678 ntBASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms