Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col5a2Q3U962 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col5a2Q3U962 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.64■□□□□ 0.26
Col5a2Q3U962 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Col5a2Q3U962 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Col5a2Q3U962 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col5a2Q3U962 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col5a2Q3U962 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col5a2Q3U962 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col5a2Q3U962 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col5a2Q3U962 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col5a2Q3U962 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC16.64■□□□□ 0.25
Col5a2Q3U962 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col5a2Q3U962 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.64■□□□□ 0.25
Col5a2Q3U962 Gm43068-201ENSMUST00000201095 1273 ntBASIC16.64■□□□□ 0.25
Col5a2Q3U962 Gm44985-201ENSMUST00000206202 1016 ntBASIC16.64■□□□□ 0.25
Col5a2Q3U962 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Col5a2Q3U962 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col5a2Q3U962 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col5a2Q3U962 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col5a2Q3U962 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col5a2Q3U962 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col5a2Q3U962 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col5a2Q3U962 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Col5a2Q3U962 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Col5a2Q3U962 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col5a2Q3U962 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col5a2Q3U962 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col5a2Q3U962 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col5a2Q3U962 Gm13730-201ENSMUST00000121036 1462 ntBASIC16.63■□□□□ 0.25
Col5a2Q3U962 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col5a2Q3U962 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Col5a2Q3U962 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col5a2Q3U962 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col5a2Q3U962 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
Col5a2Q3U962 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col5a2Q3U962 Mir877-201ENSMUST00000104738 85 ntBASIC16.63■□□□□ 0.25
Col5a2Q3U962 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC16.63■□□□□ 0.25
Col5a2Q3U962 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC16.63■□□□□ 0.25
Col5a2Q3U962 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC16.63■□□□□ 0.25
Col5a2Q3U962 AC154462.2-201ENSMUST00000227519 370 ntBASIC16.63■□□□□ 0.25
Col5a2Q3U962 Mettl6-204ENSMUST00000227595 1027 ntBASIC16.63■□□□□ 0.25
Col5a2Q3U962 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col5a2Q3U962 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col5a2Q3U962 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col5a2Q3U962 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Col5a2Q3U962 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col5a2Q3U962 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col5a2Q3U962 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col5a2Q3U962 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col5a2Q3U962 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.63■□□□□ 0.25
Col5a2Q3U962 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC16.63■□□□□ 0.25
Col5a2Q3U962 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col5a2Q3U962 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col5a2Q3U962 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col5a2Q3U962 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.62■□□□□ 0.25
Col5a2Q3U962 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col5a2Q3U962 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Col5a2Q3U962 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col5a2Q3U962 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col5a2Q3U962 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col5a2Q3U962 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col5a2Q3U962 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.62■□□□□ 0.25
Col5a2Q3U962 Gm38000-201ENSMUST00000192390 1215 ntBASIC16.62■□□□□ 0.25
Col5a2Q3U962 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC16.62■□□□□ 0.25
Col5a2Q3U962 Gm18935-201ENSMUST00000212692 664 ntBASIC16.62■□□□□ 0.25
Col5a2Q3U962 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC16.62■□□□□ 0.25
Col5a2Q3U962 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col5a2Q3U962 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Col5a2Q3U962 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Col5a2Q3U962 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.62■□□□□ 0.25
Col5a2Q3U962 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Col5a2Q3U962 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.62■□□□□ 0.25
Col5a2Q3U962 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Col5a2Q3U962 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC16.62■□□□□ 0.25
Col5a2Q3U962 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col5a2Q3U962 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col5a2Q3U962 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col5a2Q3U962 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col5a2Q3U962 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.62■□□□□ 0.25
Col5a2Q3U962 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col5a2Q3U962 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col5a2Q3U962 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col5a2Q3U962 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.62■□□□□ 0.25
Col5a2Q3U962 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col5a2Q3U962 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col5a2Q3U962 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col5a2Q3U962 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col5a2Q3U962 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
Col5a2Q3U962 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Gm38158-201ENSMUST00000194617 339 ntBASIC16.61■□□□□ 0.25
Col5a2Q3U962 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Col5a2Q3U962 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col5a2Q3U962 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms